Gene Dvul_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0465 
Symbol 
ID4662245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp591912 
End bp593111 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID639818674 
Productamidohydrolase 
Protein accessionYP_965915 
Protein GI120601515 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.742317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0452938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAG CCTTCCGCGC ACGACGCATC ATCCCCCTCG CCGGAGAGGG GCCGTCAAGA 
ACCGCGCGAG AACTGTTCTC TCCGCCCCGC GTACACGACG ACGCCGTCAT CGTGACCCGG
GGCGGTTTCG TGGAAGCCGT CGAACCCTAT GGGCACTTCC GTCGCAGGGC CGCCACCCCG
CTCACCGACA TGGGCGAGGT CACCCTCGTT CCCGGTCTGG TCAACGCCCA CGGGCACCTC
GAACTCGCCC ACCTGACAGG CAGCACCGTA CAGGGGGCAG GATTCGTGCC GTGGGTGCGC
AGCCTGCTTC CCCTCGCAGC GCATCCCCTC ACGCAAGATG CGCTCGATGC CGCCGTGCGG
CAACTTGCAG ATTGCGGCAC GGCCCATGTG GGCGACGTGG GCAACAGGGC CACACCGCAG
GTGGCAGCCG CCCTTGCCGC TGCGGACATA GGGGCCACGC TCTTCTGCGA ATGCTTCGGC
TACACACTGC CCGACCCGCC CGTGAGCGAC GCCCTTTGGC CCGACAGCGC GCGCGCCCTG
CCGCCCGACG TCTTCATGCG ACAGGCGACA CTGGCCGGAC ACGCCCTCTT CTCGACGCAC
CCGGTCACCC TCGCCGTGGC CAAGCGATGG TGCTCGCGCA ATGGTCGCCC CTTCTCCATC
CATCTGGCGG AACATCCCGA CGAGGTGGAG TTCCTGACCA CGGGCAAGGG TGCCCTCGCC
GACATGCTGG CCGTGCGCGT GCTACCCGAA GGTTTCGAGG CCCCCGGCGT GCCCCCGGTG
CGCTACGCCG CCGAACTGGG TCTGCTCGAC GAACAGACCG TGGCCGTACA TTGCACCCAG
TGCACCGCCG ATGACGCGGC CCTGCTCGCC GCCTCGGGCA CGTGGGCCTG CCTGTGCCCG
CGCTCCAACG CCGTCATCGG TGAGGGCGCA CCGCCCGTGC GCCAGCTCAT CGAAGCCGGA
GTGGGCCTCT GCTGCGGCAC GGACAGCCTC GCCTCGAACC ACGACCTCGA CCTGTGGAAC
GAGGTACGCA CGTTGCGCGA CATGGCGGCC CTGCCCGCCG CCGCGCCCCT GCGCATGGCC
ACCGTCAACG GCGCCGCGGC GCTCGGACTC GCCCACCTCG GCACGCTCGA ACCCGGCAGA
CGCGCTGCCT TCGCCATCCT GCCCGGCGAC CTTTCCCGGG ACATCCCGGC AACCGCATAA
 
Protein sequence
MQRAFRARRI IPLAGEGPSR TARELFSPPR VHDDAVIVTR GGFVEAVEPY GHFRRRAATP 
LTDMGEVTLV PGLVNAHGHL ELAHLTGSTV QGAGFVPWVR SLLPLAAHPL TQDALDAAVR
QLADCGTAHV GDVGNRATPQ VAAALAAADI GATLFCECFG YTLPDPPVSD ALWPDSARAL
PPDVFMRQAT LAGHALFSTH PVTLAVAKRW CSRNGRPFSI HLAEHPDEVE FLTTGKGALA
DMLAVRVLPE GFEAPGVPPV RYAAELGLLD EQTVAVHCTQ CTADDAALLA ASGTWACLCP
RSNAVIGEGA PPVRQLIEAG VGLCCGTDSL ASNHDLDLWN EVRTLRDMAA LPAAAPLRMA
TVNGAAALGL AHLGTLEPGR RAAFAILPGD LSRDIPATA