Gene Dvul_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0436 
Symbol 
ID4662727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp555690 
End bp557891 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content64% 
IMG OID639818640 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_965886 
Protein GI120601486 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.589571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG GCACCGAAGA CGCCCAGCGA AGGCATGAGG AACTGACGCG CGAGCGCCGT 
CGCCGTCAGC GAGAACTCAT CGCGGCGGGT GTCCTCGTCC TTGTGGTGCT GGTCGCCACA
TGGGTGGAAC TGACCTTCTT CGGGGTCGAC TCGTGGATGT TCCTCGCCCT GTTCAACGTG
AACCTTCTGC TTTCGCTGGT GGTTCTCTTT CTCGTCGTCC GCAACAGCAT CAAGCTGCTG
GTCGAACGCA GGCGCAACGT GCCGGGGGCC AAGCTCCGTA CACGGCTTGT GCTCATGTTC
ATGCTGCTCT CGCTGGCACC CACCGTCATC ATGTTCCTCG CCTCGAACAG GGTCGTCGCC
ACGTCTGTCG ACTACTGGTT CAAGAATCAG GCCGAGAACG CCATGGATGC GGCCCTTGAT
GTGGGCCAGA GCTTCTATAC CGCCTCGGCA TCACGCCTTC GCGCAAGGGC GGAACTCATC
AGCCGCGAAG TGGCCGAACG CCGCACCCCG TGGGGCAGCC CCGCCGCCGA TGCGCTTCTC
GACCGCAGGG CGAGAGAGTA TGGTCTCATC GCCGTGGGTT TCGTCACCCC CGCGCACGCA
GAGCGCAACT GGCATGCGCC TTCAGAGTTC GCGCCCGTGT GGGATGAGGC GCGCAAGCGC
ATCGCGTGGG ACCATGTGGC GGCACAGCGT TTCGGCTCGC TCCTGTGGGC TGGCGACACG
GCGGACTATG TCATCGGTGC CCTCGCCATC GATGCCGGAC GCACAGGCTA CCTCGTCGTG
GCCGAGAGCA TCGGCCAGGG GCTCATGCTC AAACTCGACC GCATCTCCAA GGGGTTCGAG
GAGTACAAGT CGCTCAAGAA CCTCAAGCGG CCGCTCAAGG TCTCGTTCAC GCTCATCCTC
GGCATCCTCA GCCTGCTGGT CGTACTGGGC GCACTCTGGC TCGGATTGCG CCTGTCCCGC
GAGTTGACGG CTCCCATTCT CGCTCTTGCG GACGGGGCCG ACCGCATCGC GAAGGGCGAC
CTCGACGTGC GGCTTGAAGA CTCGGCACAG GATGAAATCG GGCAACTGGT GCGCGCCTTC
AACAAGATGG CGGGCGACCT TGCACACAAC CGCCAGAGTC TGACCGAAGC CAACCGCCTG
CTGGCCCAGA GCAACGCCGA GATAGCAGGG CGCAACGCCT ACATCGAAGC CGTTCTCGAC
AACATCGCCG CGGGCGTCAT CTCCCTTGAT GCGTCGGGCC GCATACAGAC CGTGAACAAG
GCTGCGGCGT CCATTCTCGG CACGCCCTCG GAAAGGCTGA AGGGGAGGCG CCCTGCCGCG
TTCCTCGACG GCCCCTACCT CGACATCATC GACGACATGC TCACCCAGTT GCACAGACGT
CCCGAAATGC ACTGGGAACG CCAGATGGAC CTGTCGGGCA GCGACAGGGC ACTGAAGCTG
CTGGTCCATG CCGTGGCCCT GCGCGGGGTG GACGGCAGTG TGGATGGCAT CGTCGCCGTG
TTCGAGGACA TCTCGGAACT GGAGCGGATG CAGCGCATGG CGGCATGGCG CGAGGTGGCA
CGGCGCATCG CCCACGAGAT CAAGAATCCG CTGACCCCCA TCAAGCTTTC GGCACAACGC
CTCGAACGCA AGTTCGGCCC GCGCGTGGAC GACCCCGTGT TCGGCCAGTG CACTGCGCTC
ATCGTCAAGC AGGTGGAGCA CCTCCAGCAA ATGGTGCAAG AGTTCTCGAC ATTCGCGAAG
CTTCCGGAGG TAACGCCCCG TGCGGGTGAC ATCACTCCCC TGCTGGAGGA GGTAACCGGT
CTTTTCAGGC ATGGACATTC ACGCATCGCG TGGCAGGTGG ATATCGCCCC TGCACTGCCC
CCCGTGCGGA TGGATGGTGA AGCCCTGCAC CGGGCCTTCA TCAACATCCT CACCAACGCC
ATCGAAGCCC TCGAGGGAAC GGCGACGCCG TCCATCAACG TACAGGCCTC GCATGACGCG
GAAAGGGCGC GCGTACGCGT CGAGATTGCC GACAACGGGC CGGGGCTCAC ACCTGAAGAA
CGCTCGCGCA TGTTCGAACC CTACTTCACC AGCAAGAAGG GGGGCACAGG TCTCGGCCTC
TCCATCGTGC GCTCCATCGT CAACGACCAT GGGGGGCATG TCAGGGCTGC CGGTGCCCCC
GGCGGCGGTA CCGTTGTCAC AGTGGAACTG CCTGTGGCAT AA
 
Protein sequence
MPTGTEDAQR RHEELTRERR RRQRELIAAG VLVLVVLVAT WVELTFFGVD SWMFLALFNV 
NLLLSLVVLF LVVRNSIKLL VERRRNVPGA KLRTRLVLMF MLLSLAPTVI MFLASNRVVA
TSVDYWFKNQ AENAMDAALD VGQSFYTASA SRLRARAELI SREVAERRTP WGSPAADALL
DRRAREYGLI AVGFVTPAHA ERNWHAPSEF APVWDEARKR IAWDHVAAQR FGSLLWAGDT
ADYVIGALAI DAGRTGYLVV AESIGQGLML KLDRISKGFE EYKSLKNLKR PLKVSFTLIL
GILSLLVVLG ALWLGLRLSR ELTAPILALA DGADRIAKGD LDVRLEDSAQ DEIGQLVRAF
NKMAGDLAHN RQSLTEANRL LAQSNAEIAG RNAYIEAVLD NIAAGVISLD ASGRIQTVNK
AAASILGTPS ERLKGRRPAA FLDGPYLDII DDMLTQLHRR PEMHWERQMD LSGSDRALKL
LVHAVALRGV DGSVDGIVAV FEDISELERM QRMAAWREVA RRIAHEIKNP LTPIKLSAQR
LERKFGPRVD DPVFGQCTAL IVKQVEHLQQ MVQEFSTFAK LPEVTPRAGD ITPLLEEVTG
LFRHGHSRIA WQVDIAPALP PVRMDGEALH RAFINILTNA IEALEGTATP SINVQASHDA
ERARVRVEIA DNGPGLTPEE RSRMFEPYFT SKKGGTGLGL SIVRSIVNDH GGHVRAAGAP
GGGTVVTVEL PVA