| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0410 |
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| Symbol | |
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| ID | 4663524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 523735 |
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| End bp | 525225 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639818612 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_965860 |
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| Protein GI | 120601460 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.443941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTGTC GTGCGGGGGC GTTAGCCGCC GCACGACACA CGACACCCCA AAGGCGGTAC
AGCGTGATGA AGCAAGCATC CCTGCCAGCA GGTGCCCGGA TAGCCGGGCT CGTCGGGCGC
GAACTCGCGC TCGGCCCGGT CTTCGACGCC ATCCCCACCG GGTTGGCGGT GCTCGATGCC
GACCTGCGCA TATGCCTGAT GAACCGCGCC CTTGAGACCA TGACGGGGTT CACCACCGCC
GAGGTGGCGG GCATCCCCTG CCGGCATGTC CTTCGGGCCA GCGTATGCCT GCACCGCTGC
CCTACCCGCA CCGCTGTCTG CGATGCCACC GGCGGCAACG CGCCATGCCA TGCACAGGAG
GGCGACCTGC TCAACCGCCA TCGCCGCCGC ATTCCCGTGC GCCTGACCCT CGCCCCTCTC
CATGATGCGC AGGGGCAGCT GTGCGGCTGG CTGCATACCG CCGAAGACCT TTCGCTCGTC
CGTGAGCTTG AAGAACGGTG CAGCAAGGGG CAGGCATCCG GGCCACTGGT GGGGCGCAGC
GTGGTGATGG AGGAACTCTT CCGTACCGTG CAGGCCCTTG CCCAGACCGA GACCCCCGTG
CTCATCACGG GCGAGACGGG CACAGGCAAG GACGCCGTGG CCGAGACCAT CCACAAGGCA
TCACCGCGCG GTCGCGAACC GTTCGTCAAG GCCAGCCTGT CATCCCTCCC CGATTTTCTG
GTGGAGTCCG AACTGTTCGG CCACCGCAAG GGCGCGTTCC CCGGGGCCGA GGAAGACAAG
CCCGGCCGTT TCAGGATGGC ACAGGGCGGT ACGTTGTGCC TGTCCGAGTT GGGCGACCTG
CCCCCCGCCA TGCAGGGACG GCTCGTGACG TTCCTCGACG AGGGACTGGT CTGGCCCGTG
GGCGCCACAG ACCCCGTCAG GTGCGACGTG CGCCTGCTCG TTGCCAGCAA CCTCGACCTG
GAGGCCATGG TCGCTTCCGG AAGGCTGCGC GAAGACCTCT ACAGCAGACT GGCAGCCGTG
CGCATCCACC TGCCCCCGCT ACGCGAACGG GGCGAAGACC TCGAGTTCCT GCTCAGCCAC
TACCTTGCCC ATTTCGCCGC CAGATTGCGC AAGACCATAC ACGGGTTCTC CGGCAAATCT
CTGCGCGTGC TGCTTGCCTA CGGCTTTCCG GGCAACGTGC GTGAGCTCAA GAACATCGTC
GAGTACGCCG CGACCCTGTG TACGGGCGAG GTCGTCATGC CCTCGCACCT GCCGGCCTAC
CTCTTCCACA CGCGTCCGGC AGCCGCACCC CCGCGTGCCA TCGAACGCGA CACCCCCAAG
GGTGCCGCCG AAGACGAGGC ATCAGCCCGC AGCAGCGTCG TCGACCTCGA ACGCCGTCTC
ATCGTGGACG CGCTGGCACG CGCCGGAAAC CGCAAGGGCG AGGCGGCCCG CATCCTCGGC
TGGGGCAGAA GCACCCTGTG GCGCAAGATG AAACAGTTCG GACTGGAGTG A
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| Protein sequence | MVCRAGALAA ARHTTPQRRY SVMKQASLPA GARIAGLVGR ELALGPVFDA IPTGLAVLDA
DLRICLMNRA LETMTGFTTA EVAGIPCRHV LRASVCLHRC PTRTAVCDAT GGNAPCHAQE
GDLLNRHRRR IPVRLTLAPL HDAQGQLCGW LHTAEDLSLV RELEERCSKG QASGPLVGRS
VVMEELFRTV QALAQTETPV LITGETGTGK DAVAETIHKA SPRGREPFVK ASLSSLPDFL
VESELFGHRK GAFPGAEEDK PGRFRMAQGG TLCLSELGDL PPAMQGRLVT FLDEGLVWPV
GATDPVRCDV RLLVASNLDL EAMVASGRLR EDLYSRLAAV RIHLPPLRER GEDLEFLLSH
YLAHFAARLR KTIHGFSGKS LRVLLAYGFP GNVRELKNIV EYAATLCTGE VVMPSHLPAY
LFHTRPAAAP PRAIERDTPK GAAEDEASAR SSVVDLERRL IVDALARAGN RKGEAARILG
WGRSTLWRKM KQFGLE
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