Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0359 |
Symbol | |
ID | 4664178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 463259 |
End bp | 464965 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639818561 |
Product | glycosyl transferase family protein |
Protein accession | YP_965809 |
Protein GI | 120601409 |
COG category | [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.143693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.385412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCT CCGACGAACA CCATACCCCC CTCTCGCTGG CAGAGGACAT CGCACGCGAA CAGCAGAACC CCACCCTGCG GGCTGCCGTC CTGCATCTGC GCCTCGGTGA GACGGAACAG GCGCGCAGGC TGCTTGAAGA GGCCACAGCC AAATCGCCAC ACAACGGGGC CATACCGCTG GTCATGGCCC TGCACCTTGC CGCCTCGGGC GATGGCGAAG GTGCCGACAC ATGGTTCCGC AAGGCCCTCG CCGCCGAACC AGACCAGCCC GAGGCCCTGC GCGCCTACGG TCTCTTCCTG CTGGGGCAGG ACGCCACGGT ACGTGGCCTG CGCCTGCTGC GCATGGCGGC TGAACTTGCG CCGCAATCGC TGGCCATTGG CCTCGAATGC GCCGGTGCGG CCATCATGTG CGGCGAGTAC CACACCGCCC GCGACATGAG TCGCCGCATT CTCTCGGCAT CTCCCGGCCA CCCGCTGGCG TTGCGCAACC TCGGTGTCGC CCTCGCCGGA CTCGGCGAGA AGGCAGAGGC CACGGATATA CGCCGGCGTC TGCACGAAGC GGGGCACGAG GCCGAGGCCC AAGACCTCGA CACCGTGCTG GCGCGCATGG AACAGGACAT CCCGCCCGGT TCGCCACTGC CGGGCGACGA GGCCCTGCAC CTTGCCTTCG CCTCGCGCAG CTTCGACATC TCGCCCTTCA GGATGCTGCC GTGCGAGCAT GGACGCGACG ACGGCCCGGT GGCCCTTTCC GTCATCGTCC CCATCAAGAA CGAGGTGGAG AACCTGCCCA TCCTGCACCG CGAGGTAGCG CAGGCACTGC ACGACCTCAA ACAGCCGTGG GAACTCATCC TCGTGGATGA CGGCAGCACC GACGGCAGCA TCGAGGTGAT GGAGGGCATC GCCGCCGCCG ACCCGCGCGT GACCATCATC GTCTTCCGCC GCAACTACGG GCAGACGGCG GCCCTCAGCG CGGGCTTCAA GCTGGCGCGT GGCGAAGTGG TGGTGACGCT GGACGGCGAC CTGCAGAACG ACCCCGCCGA CATCCCCATG CTGCTGGAGG TCATGGCCGA GGGCAACGAC ATGGTGTGCG GCTGGCGCCG CGACCGCAAG GACAAGATGG TCACCCGGCG CATCCCCTCC ATGGCCGCCA ACTGGATCAT CAACAAGCTC ATCGCGGGCA CGGGTGTGCA GTTGCACGAC TTCGGCTGTT CGCTCAAGGC GTACAAGCTC AACATCGTCA AGAACATCAA CCTGTACGGA GAGATGCACC GCTTCATCCC GGTGTTCGCG GCATGGCTTG GCGTCCGCAT CGCCGAGGTG GAGGTCAACC ACCGCCCCCG CACCCACGGC GTCACCAAGT ACAACCTCTC GCGGGTATGG CGCGTCATCT TCGACCTGCT GCCGCTGCGC TTCTTCTCGG ACTACATGAC GCGGCCCATC CACTTCTTCG GCAAGATAGC CAACTACATG GTGGCCCTCG GGCTGGGCGG CATCGCCCTG ACCACCCTGC TGGCGAAACT CTTCGGCATG CCGGGCGAGA CGCTCACCTT CTGCCTCATG GTGGAGGTGC TGCTCATCGG CGGCCTGCTC ATCCTGTGTC AGGGGCTCAT CGGCGAAGTG CTCATCCGCA CCTACTTCGA GGCGCAGGGC AAGCGGCAGT TCGTCATCGA ACGCATCATC CGGAACGGCG ACACATGTGC GGAATAG
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Protein sequence | MPPSDEHHTP LSLAEDIARE QQNPTLRAAV LHLRLGETEQ ARRLLEEATA KSPHNGAIPL VMALHLAASG DGEGADTWFR KALAAEPDQP EALRAYGLFL LGQDATVRGL RLLRMAAELA PQSLAIGLEC AGAAIMCGEY HTARDMSRRI LSASPGHPLA LRNLGVALAG LGEKAEATDI RRRLHEAGHE AEAQDLDTVL ARMEQDIPPG SPLPGDEALH LAFASRSFDI SPFRMLPCEH GRDDGPVALS VIVPIKNEVE NLPILHREVA QALHDLKQPW ELILVDDGST DGSIEVMEGI AAADPRVTII VFRRNYGQTA ALSAGFKLAR GEVVVTLDGD LQNDPADIPM LLEVMAEGND MVCGWRRDRK DKMVTRRIPS MAANWIINKL IAGTGVQLHD FGCSLKAYKL NIVKNINLYG EMHRFIPVFA AWLGVRIAEV EVNHRPRTHG VTKYNLSRVW RVIFDLLPLR FFSDYMTRPI HFFGKIANYM VALGLGGIAL TTLLAKLFGM PGETLTFCLM VEVLLIGGLL ILCQGLIGEV LIRTYFEAQG KRQFVIERII RNGDTCAE
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