| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0358 |
|---|
| Symbol | |
|---|
| ID | 4664137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 461178 |
|---|
| End bp | 463271 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639818560 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_965808 |
|---|
| Protein GI | 120601408 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.395531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TAGCAGGCAT CGTCTCTCCG GGCGCGCCCG TGGCATCCGC CACGCTCGCC
GCCATGACGG AGAGTCTCGC CCATCGCGGG CCGGACGCCT GCGGCCTCTT CATCCGGCCT
TCCGGGGCGG GTAGCCCCCA TGTGGGACTC GGGCACCGCC GCCTGTCCAT CCTCGACCTC
TCCGACGCGG GCGCACAGCC CATGCAGAGT GAGGACGGGA CGTTCACGCT GGTCTTCAAC
GGCGAGATAT ACAACTACCC CGACCTGCGA CGCGACCTTG AAGCCGCCGG GCACATCTTC
CGCTCGACGT CCGACACCGA AGCCATCCTG CGCGGCTACA TGGCGTGGGG CGAAGGTGTC
GTCGCACGTC TCAAGGGCAT GTTCGCCTTC GCCCTGTGGG ACGAACGAAA GCGCAGCCTG
CTGCTGGCCC GCGACCGCTT CGGCAAGAAG CCCCTGCACT ACGCCGTCAC CCGGCAGGGC
ACACTGCTCT TCGCCTCCGA ACCCAAGGCG CTTCTCGCGC ACCCCGAATT CCGGCCCGAA
CCCGACGCCG CATCGCTTCT CCATTTCCTG CGCTACGACT ATGTGCCCGC ACCGCGTTCC
ATCTACGCCG GGGCCTCCAA GCTGCCGCCC TCGCATCTCA TGGTGTGGCG CGACGGGCGG
CTTGAAGTGC GGCGGTATGC CAGCCTCGCC TTCTCCGGCG CGACCGGGGG CCGCGGGGTT
CCGCTGCGCG AGGCCGAAGC CGCCGTGGAC GCGCTTCTCG ACGCCGCCGT ACAAAGACGC
CTCGCCAGCG ACGTGCCCCT CGGCGTCTTC CTCTCCGGCG GTCTCGACTC GTCAACGGTG
CTTGCCTACA TGACGCGGCA CATCCCCGCC CACGACATCC GCACCTTCGC CATCGGCTTC
GACGAAGCAA GCTACGACGA ATCGGCCCAT GCCGAGGCCA TGGCGCGCCA TGCCGGGTCG
CACCACACCA TGATGCGCCT GCCCGCCGCG CGGATGCTCG ACCTGCTGGA CATGGTCTGG
GCCACGCAGG ACGAACCCAT GGCCGACGCC TCCATCATCC CCACCCTGCT GCTGTGCCGT
TTCGCGCGCG AACACATCAC CGTGGCGCTG GGGGGCGACG GCGGCGACGA ACTCTTCGCG
GGCTACGACC CCGTACTCGC CGACCTGCCC GCCCGCTGCC TCGACTGGCT ACCCCCGGCG
GCCCTGCGGC TGCTACAGGG CATCGCGCTG CGGCTGCCCA CGGGTGACGC CAACATGAGC
CTCGGCTTCA AGGTTCAGCG TTTCCTCTCC GGTCTCGGGA GACGCGAGGT GGCTGCACGC
CACCAGACAT GGCTGGGGGC GTTCGACGAC GAGGGGGCAC GTGCCATGCT GCACCCCGAC
CTGCGCGCCG CCACACGCGA CGTCTCGCCC CTCGACGCGC TGGACATGCT GCGCGAGGAG
TGCCGCGACG CCTCACGGTT CGACGCCATG CTCCACTTCT ACCAGCGCTT CTACATGTGC
GGTTCCATTC TCACCAAGGT GGACAGCGCG AGCATGGCGG TCTCGCTGGA GGTGCGCTCG
CCCTTCCTTG ACCAGGACCT TGCGGACTAC GTCAACAGGC TTCCGCGTGA GCACAAGTTG
CGCGGTCTCA CCCGCAAGGT GCTGCTGCGC AGGCTCATGC GTTCGCGCAT GCCCGATGCG
CTGCTCAAAC GTCCGAAGAA GGGCTTCGGC CTGCCGCTGG CCCGGTGGTT CCGCCATGAA
CTGCGGCCCC TCGTGACCGC CATGCTCGAC CCCGGTCGCG TGGCGCAGGG CGGCCTCCTC
GACCCCGTGA CCGTGGAACG CATGGTACGC GACCACCTTT CGGGACGCCG CGACCACCGC
AAGGAGATCT GGTCGGCCCT GTGCGTCGAG GCATGGCGCG ACCGCTACCT GCATCACAGC
CGCGCCACGG CGTCCGACAC GATAGAATTC GGCACGACGC CCCGCGGAGA CGGGCACCTC
ATCACAGCGC AAGCCGTCCC TGCACGGTCT TCGGTTGCCA TCAACGACTC CACGAACGAC
AGCCCGTCAT GGGCCGCGTC CCCTTCGAGG CACAGATGCA ACGACTCAAT CTAG
|
|---|
| Protein sequence | MCGIAGIVSP GAPVASATLA AMTESLAHRG PDACGLFIRP SGAGSPHVGL GHRRLSILDL
SDAGAQPMQS EDGTFTLVFN GEIYNYPDLR RDLEAAGHIF RSTSDTEAIL RGYMAWGEGV
VARLKGMFAF ALWDERKRSL LLARDRFGKK PLHYAVTRQG TLLFASEPKA LLAHPEFRPE
PDAASLLHFL RYDYVPAPRS IYAGASKLPP SHLMVWRDGR LEVRRYASLA FSGATGGRGV
PLREAEAAVD ALLDAAVQRR LASDVPLGVF LSGGLDSSTV LAYMTRHIPA HDIRTFAIGF
DEASYDESAH AEAMARHAGS HHTMMRLPAA RMLDLLDMVW ATQDEPMADA SIIPTLLLCR
FAREHITVAL GGDGGDELFA GYDPVLADLP ARCLDWLPPA ALRLLQGIAL RLPTGDANMS
LGFKVQRFLS GLGRREVAAR HQTWLGAFDD EGARAMLHPD LRAATRDVSP LDALDMLREE
CRDASRFDAM LHFYQRFYMC GSILTKVDSA SMAVSLEVRS PFLDQDLADY VNRLPREHKL
RGLTRKVLLR RLMRSRMPDA LLKRPKKGFG LPLARWFRHE LRPLVTAMLD PGRVAQGGLL
DPVTVERMVR DHLSGRRDHR KEIWSALCVE AWRDRYLHHS RATASDTIEF GTTPRGDGHL
ITAQAVPARS SVAINDSTND SPSWAASPSR HRCNDSI
|
|---|
| |