Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0346 |
Symbol | |
ID | 4662952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 441492 |
End bp | 442877 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639818548 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_965796 |
Protein GI | 120601396 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.307472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.466912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAGCG CATCGCTCAT CAAGGAATTC GAAGCCATCA TCGGCAAAGA GAACGTCTTC ACCAGCGAAC CCGACCGCCA GAGCTACGCC TACGACTCGG CCGTGCTCGA TCAGGTCGTG CCCGCCCTCG TGCTGCGTCC CACCGAGACC GAACAGCTCG GCAAGCTCGT GAAGCTCTGC TACGAGAACG ACCACCCCAT CACCGTGCGC GGTGCTGGCA CCAATCTTTC CGGCGGCACC ATCCCCGACA AGCGCGAAGG TATCGTCATC CTCACCAACA GCCTGAACAA GATCATCGAG ATCAACGAGC AGGACCTGTA CGCCGTTGTC GAACCCGGTG TGGTCACCGC CAAGTTCGCC GCCGAAGTCG CCAAGCGCGG CCTCTTCTAT CCCCCCGACC CGGGTTCACA GGCCGTCTCC ACCCTCGGCG GCAACGTTGC CGAGAACGCC GGTGGCCTTC GCGGTCTGAA GTACGGGGTG ACCAAGGACT ACGTCATGGG CATCGAGTTC TTCGATGTGA ACGGCGGTCT GGTGAAGACC GGTTCGCGCA CCGTCAAGTG CGTCACCGGC TACAACCTCG CCGGTCTCAT GGCCGCCTCC GAAGGCACGC TCGGCGTGTT CAGCCAGATC ACCCTCAAGC TCGTGCCGCC GCCCAAGGCC TCCAAGGCCA TGATGGCCGT GTTCGACGAC GTCAACAAGG CGTCCGAGGC CGTTGCCGCC ATCATCGCCG CCCACGTGGT TCCCTGCACC CTCGAATTCA TGGACAAGTC GTCCATCAAC TACGTGGAAG ACTTCACCAA GGCAGGCCTG CCTCGTGAAG CCGCCGCCAT CCTGCTCATC GAAGTGGACG GCCACCCGGC ACAGGTCGAA GACGACGCCG CCACCGTGGT GAAGGCCCTC AACGCCTCCG GCGCCACCGA AGTGCACGTG GCCAAGGACG CCGCAGAGAA GTTCAAGCTG TGGGAAGCCC GCCGCAACGC CCTGCCCGCC CTTGCCCGCG CCCGCGCCAC CACCGTGCTT GAAGACGCCA CCGTGCCGCG CTCGCAGATT CCTGCCATGG TCAAGGCCAT CAACGACATC GCCAAGAAGC ACAACATCGC CATCGGCACC TTCGGTCACG CGGGCGACGG CAACCTGCAC CCGACCATCC TGTGCGACCG CCGCGACAAG CACGAGTTCG AGCGCGTCGA GAGCGCCGTC GACGAGATCT TCGACGTGGC CCTTTCGCTG CACGGCACCC TCTCCGGCGA GCACGGTATC GGCCTCGCCA AGTCCAAGTG GATGGAGAAG GAGACCTCGA AGGCCACCAT CGAGTACTCG CGCAACATGA AGCGCGCCAT CGACCCGAAG TACATCCTCA ACCCCGGCAA GATCATCGGA GCCTAG
|
Protein sequence | MPSASLIKEF EAIIGKENVF TSEPDRQSYA YDSAVLDQVV PALVLRPTET EQLGKLVKLC YENDHPITVR GAGTNLSGGT IPDKREGIVI LTNSLNKIIE INEQDLYAVV EPGVVTAKFA AEVAKRGLFY PPDPGSQAVS TLGGNVAENA GGLRGLKYGV TKDYVMGIEF FDVNGGLVKT GSRTVKCVTG YNLAGLMAAS EGTLGVFSQI TLKLVPPPKA SKAMMAVFDD VNKASEAVAA IIAAHVVPCT LEFMDKSSIN YVEDFTKAGL PREAAAILLI EVDGHPAQVE DDAATVVKAL NASGATEVHV AKDAAEKFKL WEARRNALPA LARARATTVL EDATVPRSQI PAMVKAINDI AKKHNIAIGT FGHAGDGNLH PTILCDRRDK HEFERVESAV DEIFDVALSL HGTLSGEHGI GLAKSKWMEK ETSKATIEYS RNMKRAIDPK YILNPGKIIG A
|
| |