Gene Dvul_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0346 
Symbol 
ID4662952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp441492 
End bp442877 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content64% 
IMG OID639818548 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_965796 
Protein GI120601396 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.307472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.466912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG CATCGCTCAT CAAGGAATTC GAAGCCATCA TCGGCAAAGA GAACGTCTTC 
ACCAGCGAAC CCGACCGCCA GAGCTACGCC TACGACTCGG CCGTGCTCGA TCAGGTCGTG
CCCGCCCTCG TGCTGCGTCC CACCGAGACC GAACAGCTCG GCAAGCTCGT GAAGCTCTGC
TACGAGAACG ACCACCCCAT CACCGTGCGC GGTGCTGGCA CCAATCTTTC CGGCGGCACC
ATCCCCGACA AGCGCGAAGG TATCGTCATC CTCACCAACA GCCTGAACAA GATCATCGAG
ATCAACGAGC AGGACCTGTA CGCCGTTGTC GAACCCGGTG TGGTCACCGC CAAGTTCGCC
GCCGAAGTCG CCAAGCGCGG CCTCTTCTAT CCCCCCGACC CGGGTTCACA GGCCGTCTCC
ACCCTCGGCG GCAACGTTGC CGAGAACGCC GGTGGCCTTC GCGGTCTGAA GTACGGGGTG
ACCAAGGACT ACGTCATGGG CATCGAGTTC TTCGATGTGA ACGGCGGTCT GGTGAAGACC
GGTTCGCGCA CCGTCAAGTG CGTCACCGGC TACAACCTCG CCGGTCTCAT GGCCGCCTCC
GAAGGCACGC TCGGCGTGTT CAGCCAGATC ACCCTCAAGC TCGTGCCGCC GCCCAAGGCC
TCCAAGGCCA TGATGGCCGT GTTCGACGAC GTCAACAAGG CGTCCGAGGC CGTTGCCGCC
ATCATCGCCG CCCACGTGGT TCCCTGCACC CTCGAATTCA TGGACAAGTC GTCCATCAAC
TACGTGGAAG ACTTCACCAA GGCAGGCCTG CCTCGTGAAG CCGCCGCCAT CCTGCTCATC
GAAGTGGACG GCCACCCGGC ACAGGTCGAA GACGACGCCG CCACCGTGGT GAAGGCCCTC
AACGCCTCCG GCGCCACCGA AGTGCACGTG GCCAAGGACG CCGCAGAGAA GTTCAAGCTG
TGGGAAGCCC GCCGCAACGC CCTGCCCGCC CTTGCCCGCG CCCGCGCCAC CACCGTGCTT
GAAGACGCCA CCGTGCCGCG CTCGCAGATT CCTGCCATGG TCAAGGCCAT CAACGACATC
GCCAAGAAGC ACAACATCGC CATCGGCACC TTCGGTCACG CGGGCGACGG CAACCTGCAC
CCGACCATCC TGTGCGACCG CCGCGACAAG CACGAGTTCG AGCGCGTCGA GAGCGCCGTC
GACGAGATCT TCGACGTGGC CCTTTCGCTG CACGGCACCC TCTCCGGCGA GCACGGTATC
GGCCTCGCCA AGTCCAAGTG GATGGAGAAG GAGACCTCGA AGGCCACCAT CGAGTACTCG
CGCAACATGA AGCGCGCCAT CGACCCGAAG TACATCCTCA ACCCCGGCAA GATCATCGGA
GCCTAG
 
Protein sequence
MPSASLIKEF EAIIGKENVF TSEPDRQSYA YDSAVLDQVV PALVLRPTET EQLGKLVKLC 
YENDHPITVR GAGTNLSGGT IPDKREGIVI LTNSLNKIIE INEQDLYAVV EPGVVTAKFA
AEVAKRGLFY PPDPGSQAVS TLGGNVAENA GGLRGLKYGV TKDYVMGIEF FDVNGGLVKT
GSRTVKCVTG YNLAGLMAAS EGTLGVFSQI TLKLVPPPKA SKAMMAVFDD VNKASEAVAA
IIAAHVVPCT LEFMDKSSIN YVEDFTKAGL PREAAAILLI EVDGHPAQVE DDAATVVKAL
NASGATEVHV AKDAAEKFKL WEARRNALPA LARARATTVL EDATVPRSQI PAMVKAINDI
AKKHNIAIGT FGHAGDGNLH PTILCDRRDK HEFERVESAV DEIFDVALSL HGTLSGEHGI
GLAKSKWMEK ETSKATIEYS RNMKRAIDPK YILNPGKIIG A