Gene Dvul_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0306 
Symbol 
ID4663955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp378342 
End bp381905 
Gene Length3564 bp 
Protein Length1187 aa 
Translation table11 
GC content65% 
IMG OID639818507 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_965756 
Protein GI120601356 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA AAGGTCCCCA TATTTCCATT TCCGCCGACT TCGTGGTCAA CCGTATGCTC 
CGCATCAACC TCGACGAGTT CGAGGACTGG CCGGAGGCCG TGCGCGAGGT TGCCATCGAG
ATCGCGGAAG AGCTTTTCCT CGTCGTCTAC AATCCGTTCA TCGACGCCGA GACCGTGAAG
ACCAGCGTGC GCACCCGGTT CGAGAGCGAA AAACCGGCTC TCGCCCACCA TTACGCCACG
AGCATCGGTG AAGGCATCAC CATGTTCTGG AGTGCACACG AGGCCGAAGT GGCCTTCCGC
GATGAACTCA TCCGCCGTCT GGGGCAGATG CTGCCCAAGG CGTGCATCGA CTCCCGCCCC
GCTGCGCTGG TGGAGAATTC CACCGACGCC ACCGACCTTC GCATGGAATT GCCCATCCTC
GTGGTCGCGC CCGACACGGC GGAACAGGTG AGTGCCATCG TGCGTCTCGC CAACGAGATG
AAGTTCGCAA TCATCCCGCG TGGCGGCGGT TCCGGTCTCA CCGGCGGTGC CGTTCCCGCG
CGTCGGCGCA CGGTCATCAT GAGCCTCACC CGCCTCACGC GCATCACCAG TGTCGACACC
GATGCCCTGC GCCTGTGCTG CGAGGCGGGC GTCATCACCA ACGACGCCAT CCGTGCGGCG
TCTGCCAAGG GGCTGCTCTT CACCGTCGAC CCCGCGTCCA AGACGGCGTC CACCATCGGC
GGCAACATCT CCGAGAACTC CGGCGGGCCG TTCGCCTTCG AATACGGCAC CACGCTCGAC
AACCTGCTCT CATGGCGCAT GGTCACCCCC ACGGGTGAGA TCATCGACGT GGAGCGCGCC
GACCACCCCG GCCACAAGAT ACTGCCCGAC GAGACGGCGG TGTTCGAGGT CAAGGACGTG
AGCGGCGGCG TGCGCAACGT GGTGCACCTG CGGGGCGACG AGATACGCCT GCCCGGCCTT
GGCAAGGACG TGACGAACAA GGCCCTCGGC GGGCTGCCCG GTGTGCAGAA GGAGGGCGTG
GACGGCATCA TCACCGAAGC CTGCTTCGCC CTCTACCGCA AGCCCGTGTA CTCGCGGGTT
CTGGTGCTGG AGTTCTTCGG ACGCTCCATG CACAACGCCA TGCTGGTCAT CAAGGACGTC
ATCGGCATGC GCGACCGCAT CCGGCAGGAT GGCGACTACG TGAAGTTCTC CGCCCTTGAG
GAGTTCGGCA CCAAGTACGT GCAGGCCATC GAGTACCGCA AGAAGTCGGA CGTCTACGAG
GGCGAGCCCA TCTCGGTGCT CATCATCCAG ATGGACGGCG ACGACGAGTA CCTGCTCGAC
CGCACCGTGC AGGAGGTGGT GGACATCGCC ACCCCGTACG ACAACGTGGA TGCCTTCGTG
GCACGCGACG AGAAGGAGGC CGAGGTCTTC TGGGAAGACA GGCACCGCCT CTCCGCCATC
GCCAGACGCA CCTCGGGCTT CAAGATCAAC GAGGACGTGG TCATCCCCAC CGACTCCATC
CCCGATTTCG CCCTGTTCAT CGAACAGCTC AACCTCGAGT GCTCGGCACA GGCCTACCGG
TCGGCCCTGC AGGAGGTGGG GCGCTTGCAG GGGATGCCGA TGGAGGACAA GGACATCAAC
CGCGAGTTCA CCTATGCCTC GCGTGCGGGG CGCGGTGACA TCTCGGCGTC GGAACTCAGC
GACGAGGAGA TGCAGATTCG CGCGGTGGTC TTCCTTGGCG AACTGGGGCA GAAGTACCCC
AACCTCGCCC GTCGTATCGA GCGCATCAAG GACCACATGC TGGCCACGCG CATCATCGTG
GCCAACCACA TGCACGCCGG AGACGGCAAC TGCCACGTCA ACATCCCGGT CAACTCCAAC
GACCCCGTGA TGCTGCACAA TGCGGAGCAG GTGGCGGCAC GCGTCATGTC CAAGGCGCAG
GAGTTCGGTG GCGAGGTGTC GGGCGAGCAC GGCATCGGCA TCACCAAGAT AGGCTTCCTG
CGAGCGGACA AGATGGAGGC CCTGAAGGAG TTCAAGGCCC GCGTCGACCC GCGCAACGTG
CTGAACCCCG CCAAGCTGAC GCAGCGAGAA CTGCCGGTTC GTCCGTTCAC CTTCTCGTTC
AACCGCCTCA TCGAGGACAT CCGCCAGAGC GGTCTGCCCG ACAAGGAACG GCTCATCACC
CTGCTCGCCA ACGTGCAGAT CTGCACCCGT TGCGGCAAGT GCAAGCAGGT GTGCCCCATG
CACTACCCCG AGCAGTCGTT GCAGCACTAC CCGCGCAACA AGAACATCGC CCTCGGTGCG
CTCATCGAGG CGGTGTACTA CTCGCAGGTG AACAAGGGCA GGCCCGATCC CCTTCTGCTG
ACCGAAGTAC GGACCATGAT GGAGCACTGT ACCGGTTGCG GCAAGTGTGC CGCGGTGTGT
CCCGTCAAGA TCAACTCCGG CGAGGTGGCA CTGGCGCTCA GGGCCTTCGT CGAAGAGGAG
GGCGCGGGCG GACACCCCAT CAAGAGCCGG GTGCTCGACT GGCTGGTGGG GGACCCCGCG
GCACGTGTTC CGCGTGCCGC CAAGCTCGCC GCCGTGGGGC AGAAGGTGCA GAACCGCTTC
GTGGGACTGG TGCCCGCAGG GTGGCGCGAA CGCATGGACA ACCCGCTCTT CGCAGGGCCG
GGGCCGGAGG TGGGGTACAA CAACCTCGCC GAGGCCGTAC GGCTGGACAA GGGTTCCATC
TTCGTGCCCG CGCAGGGCGA CAGGGCGACC GAGGCGGTAC TCTACTTCCC CGGATGCGGC
GGTAGTCTCT TCTATCGCAA CATCGGTCTT GCGGGGCTCA TGCTCATGCT CGAAGCGGGC
GTGGGCGTGG TGATGCCCGA CAGGCACCTG TGCTGCGGCT ATCCGCTGCT GGCGGCAGGG
GCCGACGAGA GTTTCACGAA GAACCTCGAC CGCAACCGCA CGGCGCTGCG GGCTGTCATC
GAGAAGGCGC GTGCTGCGGG TCTCGAGGTC AGCCACGTAA TCACCGCCTG CGGTTCGTGC
CGCGACGGTC TCGCACGGCA TGAACTGCCC GGTCTGTTCG GCGGTGGGAT GCAGCACAAG
GACCTCGTGC AGTTTCTTGT GGAACGCATG CCCGCCACCA CCAAGGCTGA AGGCCGAGAG
GTGCTCTACC ACCCGGCGTG CCACGCCGAA TGGACGGGGG TGCACAAGGT CAAGGCCGCA
GGCATCTATG CGCAGGCCCT CGGGGCGTTC ACCGGCGCGA AGCTGCGGGT CAACCCCGGC
TGCTGCGGCG AATCCGGCAT GGGGGCCATG ACCTCGCCCT CCATCTACAA CCGTTTGCGT
CGCCGCAAGC GGCAGCGCCT TGAGGCCGAC TTCGCCAGCT ACGACCCGCA GGGGCCGGTG
GTGGTGGGGT GTCCCTCGTG CAAGGTGGGC ATTGCCCGCA CGCTGTTGGC CCTGCGCGAC
AAGAGGCCGG TGCTGCATAC CGTGGAATGG CTGGCGGCCC TGCGCCACGG CGAGGACTGG
CGGCGGCATT TCCGCCGTGC GGTACTCGAT TCGCTCGGTC GCGAGGCCGT GCGTACCGTG
GATATGAGCG GGCTCGACGG CTGA
 
Protein sequence
MPHKGPHISI SADFVVNRML RINLDEFEDW PEAVREVAIE IAEELFLVVY NPFIDAETVK 
TSVRTRFESE KPALAHHYAT SIGEGITMFW SAHEAEVAFR DELIRRLGQM LPKACIDSRP
AALVENSTDA TDLRMELPIL VVAPDTAEQV SAIVRLANEM KFAIIPRGGG SGLTGGAVPA
RRRTVIMSLT RLTRITSVDT DALRLCCEAG VITNDAIRAA SAKGLLFTVD PASKTASTIG
GNISENSGGP FAFEYGTTLD NLLSWRMVTP TGEIIDVERA DHPGHKILPD ETAVFEVKDV
SGGVRNVVHL RGDEIRLPGL GKDVTNKALG GLPGVQKEGV DGIITEACFA LYRKPVYSRV
LVLEFFGRSM HNAMLVIKDV IGMRDRIRQD GDYVKFSALE EFGTKYVQAI EYRKKSDVYE
GEPISVLIIQ MDGDDEYLLD RTVQEVVDIA TPYDNVDAFV ARDEKEAEVF WEDRHRLSAI
ARRTSGFKIN EDVVIPTDSI PDFALFIEQL NLECSAQAYR SALQEVGRLQ GMPMEDKDIN
REFTYASRAG RGDISASELS DEEMQIRAVV FLGELGQKYP NLARRIERIK DHMLATRIIV
ANHMHAGDGN CHVNIPVNSN DPVMLHNAEQ VAARVMSKAQ EFGGEVSGEH GIGITKIGFL
RADKMEALKE FKARVDPRNV LNPAKLTQRE LPVRPFTFSF NRLIEDIRQS GLPDKERLIT
LLANVQICTR CGKCKQVCPM HYPEQSLQHY PRNKNIALGA LIEAVYYSQV NKGRPDPLLL
TEVRTMMEHC TGCGKCAAVC PVKINSGEVA LALRAFVEEE GAGGHPIKSR VLDWLVGDPA
ARVPRAAKLA AVGQKVQNRF VGLVPAGWRE RMDNPLFAGP GPEVGYNNLA EAVRLDKGSI
FVPAQGDRAT EAVLYFPGCG GSLFYRNIGL AGLMLMLEAG VGVVMPDRHL CCGYPLLAAG
ADESFTKNLD RNRTALRAVI EKARAAGLEV SHVITACGSC RDGLARHELP GLFGGGMQHK
DLVQFLVERM PATTKAEGRE VLYHPACHAE WTGVHKVKAA GIYAQALGAF TGAKLRVNPG
CCGESGMGAM TSPSIYNRLR RRKRQRLEAD FASYDPQGPV VVGCPSCKVG IARTLLALRD
KRPVLHTVEW LAALRHGEDW RRHFRRAVLD SLGREAVRTV DMSGLDG