Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0278 |
Symbol | |
ID | 4664023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 348236 |
End bp | 349627 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639818479 |
Product | WD40 domain-containing protein |
Protein accession | YP_965728 |
Protein GI | 120601328 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000605867 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000100324 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGCCGACCA GCGGAACGCT CATGGTGACT GCTGGCAAAA CACTTGGAAA GCGGATGAGT ACAATGCGCC ATCGTTCCTG TTTCAGCCTT TTCGCGGGCC TTGCGCTCGT TTTCTGCCTT GCCGTGGGCA CTGCGGCTGC AGGCCCCGTG CAGGTGGACA TCTATGGCCC GGGTCAGGGT AGCCTCAACC TTGCCATGGC TGCCCCCCTC GGCCCCACGC CGGGCACCCC TGTGTCTGGC ATGGGCGTCA AGCTCAACGG TTTCATCAAC GAGAACCTGA GCTTCCTGCC ATTCCTGCGC CTTGTCGACC AGCGGGCCAT CCTTGGCGGC ACGGTTATGC AGGGCTACAA GTCCCCGGAC ATCGACCTCA AGCGCTTCCA ACTCGCAGGG GCCGACCTCG TGGTGACAGC AGGCTGGCCG CAGGGCGACG CCTCCGGTTC GTTCGTCGAA CTGCGTGTCT ACGAAGCCCT GTCCGGCAAA CTGGTCTTCG GCAAGGCCTA CTCCCATGTC GAAGACGGCC TGTTGCCCAA CGTGGCTGAC AGGTTCTGTT CCGACCTCAT GAAAGCCCTC ACCGGACGTG GCGAGTTCTT CAAGTCGACT CTCGCGTTCG TCAAGCACGA CGGAAAGAAC AAGCGTGACG TCTGGCTGGT CAAACCCGTT GGGCGTGACC TGCGCAAGAT TACCAACCTT CCCGGCGAAG CCCTTTCCCC CTCGTGGTCG CCCGACGGTC GTTTCGTGGT GTTCAGCCAT TTCGACGACC GCTCGCACGC TCTCGGGGTA TGGGACAGGC TCACCCGGCA GGTGCAGCGC ATCCGTTTCC CCGGCAACAC GGTCATCGGC CCGTGCTTCC TGCCGGACAA CAAGGTGGCG GTCAGCCTTT CGTCAGGCCG CAACCCCGAC ATCTTCCTGT TGAACCACCT GTTCAAGAAG GAGCGCGAAC TGGAGGCCAA CCCCTCCATC AACGTCTCGC CCTCGTTCGA TGCGACAGGT ACCAAGATGG CGTTCACGTC CAGCCGCATG GGCGGGCCGC AGGTTTTCAT GAAGGACATG ACCACCGGGC AGGTCACCCG CATCAGCAAG ACGGGTTCGT ACAATACCGA ACCGTCCATA AGCCCCGACG GAACGCTCGT GGCGTTCACG AAGATGACGG ACACGGGTCA TCGCATCTTC GTCTATGACA TGGTGACCCA GAGCGAACGT CAGGTGTCGT TCGGCCCCGG GCGTGACGAG CAGCCCTCGT TCGCCCCTGA CAGCTACTTT CTGGCGTTCA CGTCCAATCG CAACGGGGCG CAGCAGATCT TCCTCGTGAC CCGTCACGGG GGCGATCCCA AGCGCGTTCC CACCGGCCCG GGCGATGCTT CGTTCGCCCG GTGGGGCATG ATTCCCGAGT AG
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Protein sequence | MPTSGTLMVT AGKTLGKRMS TMRHRSCFSL FAGLALVFCL AVGTAAAGPV QVDIYGPGQG SLNLAMAAPL GPTPGTPVSG MGVKLNGFIN ENLSFLPFLR LVDQRAILGG TVMQGYKSPD IDLKRFQLAG ADLVVTAGWP QGDASGSFVE LRVYEALSGK LVFGKAYSHV EDGLLPNVAD RFCSDLMKAL TGRGEFFKST LAFVKHDGKN KRDVWLVKPV GRDLRKITNL PGEALSPSWS PDGRFVVFSH FDDRSHALGV WDRLTRQVQR IRFPGNTVIG PCFLPDNKVA VSLSSGRNPD IFLLNHLFKK ERELEANPSI NVSPSFDATG TKMAFTSSRM GGPQVFMKDM TTGQVTRISK TGSYNTEPSI SPDGTLVAFT KMTDTGHRIF VYDMVTQSER QVSFGPGRDE QPSFAPDSYF LAFTSNRNGA QQIFLVTRHG GDPKRVPTGP GDASFARWGM IPE
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