Gene Dvul_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0278 
Symbol 
ID4664023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp348236 
End bp349627 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content62% 
IMG OID639818479 
ProductWD40 domain-containing protein 
Protein accessionYP_965728 
Protein GI120601328 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000605867 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000100324 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGCCGACCA GCGGAACGCT CATGGTGACT GCTGGCAAAA CACTTGGAAA GCGGATGAGT 
ACAATGCGCC ATCGTTCCTG TTTCAGCCTT TTCGCGGGCC TTGCGCTCGT TTTCTGCCTT
GCCGTGGGCA CTGCGGCTGC AGGCCCCGTG CAGGTGGACA TCTATGGCCC GGGTCAGGGT
AGCCTCAACC TTGCCATGGC TGCCCCCCTC GGCCCCACGC CGGGCACCCC TGTGTCTGGC
ATGGGCGTCA AGCTCAACGG TTTCATCAAC GAGAACCTGA GCTTCCTGCC ATTCCTGCGC
CTTGTCGACC AGCGGGCCAT CCTTGGCGGC ACGGTTATGC AGGGCTACAA GTCCCCGGAC
ATCGACCTCA AGCGCTTCCA ACTCGCAGGG GCCGACCTCG TGGTGACAGC AGGCTGGCCG
CAGGGCGACG CCTCCGGTTC GTTCGTCGAA CTGCGTGTCT ACGAAGCCCT GTCCGGCAAA
CTGGTCTTCG GCAAGGCCTA CTCCCATGTC GAAGACGGCC TGTTGCCCAA CGTGGCTGAC
AGGTTCTGTT CCGACCTCAT GAAAGCCCTC ACCGGACGTG GCGAGTTCTT CAAGTCGACT
CTCGCGTTCG TCAAGCACGA CGGAAAGAAC AAGCGTGACG TCTGGCTGGT CAAACCCGTT
GGGCGTGACC TGCGCAAGAT TACCAACCTT CCCGGCGAAG CCCTTTCCCC CTCGTGGTCG
CCCGACGGTC GTTTCGTGGT GTTCAGCCAT TTCGACGACC GCTCGCACGC TCTCGGGGTA
TGGGACAGGC TCACCCGGCA GGTGCAGCGC ATCCGTTTCC CCGGCAACAC GGTCATCGGC
CCGTGCTTCC TGCCGGACAA CAAGGTGGCG GTCAGCCTTT CGTCAGGCCG CAACCCCGAC
ATCTTCCTGT TGAACCACCT GTTCAAGAAG GAGCGCGAAC TGGAGGCCAA CCCCTCCATC
AACGTCTCGC CCTCGTTCGA TGCGACAGGT ACCAAGATGG CGTTCACGTC CAGCCGCATG
GGCGGGCCGC AGGTTTTCAT GAAGGACATG ACCACCGGGC AGGTCACCCG CATCAGCAAG
ACGGGTTCGT ACAATACCGA ACCGTCCATA AGCCCCGACG GAACGCTCGT GGCGTTCACG
AAGATGACGG ACACGGGTCA TCGCATCTTC GTCTATGACA TGGTGACCCA GAGCGAACGT
CAGGTGTCGT TCGGCCCCGG GCGTGACGAG CAGCCCTCGT TCGCCCCTGA CAGCTACTTT
CTGGCGTTCA CGTCCAATCG CAACGGGGCG CAGCAGATCT TCCTCGTGAC CCGTCACGGG
GGCGATCCCA AGCGCGTTCC CACCGGCCCG GGCGATGCTT CGTTCGCCCG GTGGGGCATG
ATTCCCGAGT AG
 
Protein sequence
MPTSGTLMVT AGKTLGKRMS TMRHRSCFSL FAGLALVFCL AVGTAAAGPV QVDIYGPGQG 
SLNLAMAAPL GPTPGTPVSG MGVKLNGFIN ENLSFLPFLR LVDQRAILGG TVMQGYKSPD
IDLKRFQLAG ADLVVTAGWP QGDASGSFVE LRVYEALSGK LVFGKAYSHV EDGLLPNVAD
RFCSDLMKAL TGRGEFFKST LAFVKHDGKN KRDVWLVKPV GRDLRKITNL PGEALSPSWS
PDGRFVVFSH FDDRSHALGV WDRLTRQVQR IRFPGNTVIG PCFLPDNKVA VSLSSGRNPD
IFLLNHLFKK ERELEANPSI NVSPSFDATG TKMAFTSSRM GGPQVFMKDM TTGQVTRISK
TGSYNTEPSI SPDGTLVAFT KMTDTGHRIF VYDMVTQSER QVSFGPGRDE QPSFAPDSYF
LAFTSNRNGA QQIFLVTRHG GDPKRVPTGP GDASFARWGM IPE