| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0235 |
|---|
| Symbol | rpsA |
|---|
| ID | 4662726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 288966 |
|---|
| End bp | 290699 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639818431 |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | YP_965686 |
|---|
| Protein GI | 120601286 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0539] Ribosomal protein S1 |
|---|
| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000120876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA CCCCTGAAAC CATGGAAAAT CACGCTTTCG ACGCAGATAT GAGCTTCGAA
AGCGCCCTTG AGAACTACCT CAGCTCCGAC TTCGGCGACC TTGAAGAAGG TTCCATCGTC
AAGGGCGAGA TCGTCCGCCT CGGCGACGAC TACGTTCTCG TCGACGTGAA CTTCAAGTCC
GAAGGCCAGA TCGCTGCCAA CGAATTCAGG GATGCCAACG GCGACCTGAT CATCGGCGTG
GGCGACCGGG TAGACGTCTT CGTCGTTCGC AAGAACGAGA TGGAAGGCAC CATCACCCTG
TCCTACGAGA AGGCCAAGCG CATGCAGCTC TTCGACCAGC TCGAAGAAGT GCAGGAGAAG
AACGGCGTCA TCAAGGGTCG TATCGTTCGT CGCATCAAGG GTGGCTACAC CGTCGACCTC
GGCGGTGTGG AAGCGTTCCT GCCCGGCTCG CACGTCGACC TGCGCCCCGT GCCCGACATG
GACGCGCTGG TGAACCAGGA ATACGAATTC CGCGTTCTCA AGATCAACCG CCGCCGCAGC
AACGTCATCG TTTCCCGCCG CGTGCTCCTC GAAGAGGAAC GCGACTCCAA GCGTCAGGAT
CTTCTGCGTA CCCTCGAAGA AGGTCAGGTG GTCAAGGGCA AGGCGAAGAA CATCACCGAG
TACGGCGTGT TCGTCGACCT CGGCGGTCTC GACGGCCTGC TGCACATCAC CGACATGTCG
TGGAAGCGCA TCCGTCACCC CAAGGAACTG GTCTCCCTCG GTCAGGAACT GGAACTCAAG
GTTCTCTCCT TCGACCGCGA CAGCCAGAAG GTCTCCCTCG GCATGAAGCA GCTGGTGGCC
GACCCGTGGC AGGACATCAC CGCCAAGTTC CCCGAAGGTC TGCGCGGTCA GGGCAAGGTC
ACCAACCTTG TCGACTACGG TGCCTTCGTC GAACTCGAAC CCGGTGTGGA AGGCCTGGTG
CACATCTCCG AGATGTCCTG GACCCGCAAG CTGCGTCATC CTTCGCAGAT GGTGCGCGTG
GGCGATGAAG TCGAGGTGGT CATCCTCGGC GTCGACCCCG ACAAGAAGCG CATCTCCCTC
GGCATGAAGC AGGTCAAGCC CAACCCGTGG GAAGTCGTGG CCGAGAAGTA CCCCGAAGGG
ACCATCCTTG AGGGCGTCAT CAAGAACATC ACCGAATTCG GCATGTTCAT CGGCATCGAA
GACGGCATCG ACGGCCTCAT CCATGTGTCC GACATCAGCT GGACCAAGAA GATCCGTCAT
CCCAACGAGA TGTACAAGGT CGGCGATGTC GTGCAGGCCA AGGTGCTCAC CGTCGATCAG
GAGAACGAGA AGTTCACCCT CGGCGTGAAG CAGCTTGCCG AAGACCCGTG GAGCCGTGTG
CCCGCCACCT ACCCCGTGGG CACCCTCGTC ACCGGTAGCG TGACCAACAT CACCGACTTC
GGCCTGTTCG TGGAAGTGGA AGAGGGCATC GAAGGCCTCG TCCACGTCTC CGAAATCAGC
CAGAAGAAGA TCAAGTCTCC TTCCGAGATC TACAAGGAAG GCCAGGAGAT CCAGGCCAAG
GTCATCCACG TGAGCGCGGA AGAGCGTCGT CTCGGCCTCT CCATCAAGCA GCTCAAGGAT
GAAGAAGAGC GCCGCAAGCC CAAGGAGTTC CGTTCCGGTT CTCCCGAAGT GGGTGGCCAG
ACCCTTGGCG ATATCCTCAA GCTGAAGCTG GAAGAGGATG CAGCCGACAA CTAG
|
|---|
| Protein sequence | MATTPETMEN HAFDADMSFE SALENYLSSD FGDLEEGSIV KGEIVRLGDD YVLVDVNFKS
EGQIAANEFR DANGDLIIGV GDRVDVFVVR KNEMEGTITL SYEKAKRMQL FDQLEEVQEK
NGVIKGRIVR RIKGGYTVDL GGVEAFLPGS HVDLRPVPDM DALVNQEYEF RVLKINRRRS
NVIVSRRVLL EEERDSKRQD LLRTLEEGQV VKGKAKNITE YGVFVDLGGL DGLLHITDMS
WKRIRHPKEL VSLGQELELK VLSFDRDSQK VSLGMKQLVA DPWQDITAKF PEGLRGQGKV
TNLVDYGAFV ELEPGVEGLV HISEMSWTRK LRHPSQMVRV GDEVEVVILG VDPDKKRISL
GMKQVKPNPW EVVAEKYPEG TILEGVIKNI TEFGMFIGIE DGIDGLIHVS DISWTKKIRH
PNEMYKVGDV VQAKVLTVDQ ENEKFTLGVK QLAEDPWSRV PATYPVGTLV TGSVTNITDF
GLFVEVEEGI EGLVHVSEIS QKKIKSPSEI YKEGQEIQAK VIHVSAEERR LGLSIKQLKD
EEERRKPKEF RSGSPEVGGQ TLGDILKLKL EEDAADN
|
|---|
| |