Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0143 |
Symbol | |
ID | 4662929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 174879 |
End bp | 176504 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639818339 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_965594 |
Protein GI | 120601194 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.302016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAA GCCCTCACCG CCCGCATCCT GACAGGAGCC CTTCAGGTCG CCATAGCACC TTTACCCCCC TTCTTCGCGC CTGCCTGACA CCCGTTCTTC TGCTCACCCT TCTGACAGCC TGCGCCAAAG TGGGGCCGGA CTTCAGCGCC CCCGGGGGGG ACGTCCCCGA CGTCTGGCAG GATGCCTCAC ATCCTGTGGC ATCCTCCGAT GCGGATGTGG ACGGAACGTG GTGGAACACC TTCAATGACC CGGTGCTGGA CAGCCTCGTC ACGGAAGCGC GTAGCGCGAA CCTGTCACTC CACCTTGCGG CGTTGCGCGT CTTCGAAGCC CGTGCGCGGC TGGGGGCGGC GGTAGGCAAC CTCTACCCGC AAACGCAGCA GGGGACCGGG GGCCTCACGT GGACACACCC CAGCGACAGG GCGCCCACAG CCCCGCAGCC GACGACGGGG CGCGACAACC CCGACTATGT ACAGACGAGC GCAGGTCTCG ATGTCGTCTG GGAACTCGAC TTCTGGGGCA AATTCCGCAG GGGCATCGAG GCCGCAGATG CGGACCTGCG CGCGTCGATG GCAGACCATC AGACCGCGCT GGTATCCGTC TCCGCCGAAG TCGCCCGTTC CTACATCCTG TACCGCACGG TGCAGAAACA GCTTGCCATC GCGGAGACCA ACGTGGCCAT CCAGCGCGAG AGTCTGCGCA TCGCCACGGC CCGCTTCAAT TACGGCGCCA CCAGCGAACG CGACATGCGA CAGGCCCTCT CGCTGCTACG CGACACCGAG GCGCGCATCC CCAATCTTGC CCACTCTCTC CGCGAGACCC GCAATGCGCT TTGCGTGCTG CTTGGCAAGG CCCCGCAGGA TATCAGCGCA CGACTCGGAG ACGCGCCCAT ACCCACCGCC CCAACACACG TCGCGGTGGG CATACCCGCC GACCTGTTGC GGCGGCGTCC CGACGTACAC AAGGCCCTCG CCACAGCCGC AGGGCAATGC GCACGACTCG GCGTGGCCAA GGCCGATTTC TACCCGGCCT TCACACTGGG CGGCTTCGTC GGGTTCACAG CCAGCAATGT CGGGTCGTTC GGGCTTGGAG ACACGTTCTC GAACGGCTTC ACCGCGTATG GGGGGCCCGG ACTTTCCCTG CCCCTGTTCA ACTACGGACG CATTGTCAGC AACGTACGCG CGCAGGACGC CCGGTTCCAG CAGTCACTGA CAAGCTATCG GGAGACCGTA CTGGTGGCCC TTCGTGAGAC GGAGGACGCC ATAGACAGGT TCATTCAGGC GCAGGGCCGT ACGGCACTGC TGACCGAAAG CGCATCCGAC GCCGCACGGT CCATGCAACT GGCCCTCATC CAGTATCAGG AAGGTTCCAC CGATTTCACC ACCGTGCTCA CCGCAGCGCG CGACCTCGCA ACCAGAGAAG ACGCCCTCGC CGCGGCCAAA GGCGAAATCT GCCAGAGCCT CGTCGCCATG TTCAAGGCAC TGGGAGGAGG CTGGCACAAG CTTCCCGGCG ACGTCTTCAT TCCCGTCAAC GCCCTCCGTG AGATGCGTGA ACGCACACAC TGGGGCTCAC TGCTTGAAGA GGATGCCCCA CCAGCGAGTG AGGGCATCAG GCTACCCGAC ATGTAG
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Protein sequence | MPESPHRPHP DRSPSGRHST FTPLLRACLT PVLLLTLLTA CAKVGPDFSA PGGDVPDVWQ DASHPVASSD ADVDGTWWNT FNDPVLDSLV TEARSANLSL HLAALRVFEA RARLGAAVGN LYPQTQQGTG GLTWTHPSDR APTAPQPTTG RDNPDYVQTS AGLDVVWELD FWGKFRRGIE AADADLRASM ADHQTALVSV SAEVARSYIL YRTVQKQLAI AETNVAIQRE SLRIATARFN YGATSERDMR QALSLLRDTE ARIPNLAHSL RETRNALCVL LGKAPQDISA RLGDAPIPTA PTHVAVGIPA DLLRRRPDVH KALATAAGQC ARLGVAKADF YPAFTLGGFV GFTASNVGSF GLGDTFSNGF TAYGGPGLSL PLFNYGRIVS NVRAQDARFQ QSLTSYRETV LVALRETEDA IDRFIQAQGR TALLTESASD AARSMQLALI QYQEGSTDFT TVLTAARDLA TREDALAAAK GEICQSLVAM FKALGGGWHK LPGDVFIPVN ALREMRERTH WGSLLEEDAP PASEGIRLPD M
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