Gene Dvul_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0081 
Symbol 
ID4664965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp98080 
End bp98799 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID639818274 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_965532 
Protein GI120601132 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.316272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC GCATCACATG GCACGGTCAT TCGAACTTCC AGGTCGCCTC CGGTGGCACC 
AATGTGCTCA TCGACCCGTT CTTCGACGGC AACCCCGTCG CCGCAACGCG ATGGGACGCC
ATCGACCGGC CCGACCTCGT TCTCGTGACA CACGACCATG GCGACCATGT GGGTCAGGCC
ATCGACATCT GCAAGGCCAC GGGGGCGAAA CTGGGCTGTG TGGTCGGCAC GGATGCCCGC
CTCGTCGAGG CGGGGCTGCC GCGTGAACTG GTGCTGAACG GCATCGGCTT CAACATCGGC
GGCACGGTGG AATGCGCCGG AGTGCGCATC ACCATGACAC AGGCGTACCA CTCTTCGGAG
TCGGGCGTTC CGGTAGGCTA CATCGTGACC ATGCCGGACG GATTCACCTT CTACCATGCG
GGCGACACGG GCATCTTCTC GGAGATGGAG CTATGGGGCC GCCTGTATGC CATCGACCTC
GCCCTGTTGC CCATAGGCGG GGTGTTCACC ATGGACCCGC GTCAGGCCGC ACTCGCGTGC
AGCCTCTTGC GTGCACGGTC CGTGATTCCC ATGCACTGGG GAACGTTCCC CGTGCTGGAG
CAGAACACCA CGCGCTTCAG GGAGCAACTT GCGAACCACG CTCCGGACTG CCGACTGTTC
AACATGACGC CAGGCGAGAG CCTGACTCTC GACAGAAGCC AGGAAGGGTG CGCCTGCTAG
 
Protein sequence
MQTRITWHGH SNFQVASGGT NVLIDPFFDG NPVAATRWDA IDRPDLVLVT HDHGDHVGQA 
IDICKATGAK LGCVVGTDAR LVEAGLPREL VLNGIGFNIG GTVECAGVRI TMTQAYHSSE
SGVPVGYIVT MPDGFTFYHA GDTGIFSEME LWGRLYAIDL ALLPIGGVFT MDPRQAALAC
SLLRARSVIP MHWGTFPVLE QNTTRFREQL ANHAPDCRLF NMTPGESLTL DRSQEGCAC