Gene Dvul_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0079 
Symbol 
ID4664666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp96130 
End bp97728 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content67% 
IMG OID639818272 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_965530 
Protein GI120601130 
COG category[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCG TAGAATCGTT CAAGGACCTC CCCCTCGAAG AGGAACTGCT CAAGGCCATC 
GAAGAACTCG GCTTCACCGA GCCCTCGCCC ATCCAGTCCA TCGCCATCCC CCGCCTGCTT
GAAGGCCGCG ACGTGATAGG TCAGGCCCAG ACCGGCACCG GCAAGACCGC CGCCTTCGGT
CTGCCCCTGC TTCAGCGCAT CGACGCCGCC GACCGCTCGG TACAGGCCCT CGTGCTCTGT
CCCACCCGTG AACTGGCCCT GCAGGTGGCC AATGGCCTCA CCGCCCTCGC CAAGCATCTG
CGCGGGGTAC GCATCCTCTC CGTGTACGGC GGCCAGCCCA TCGAACCGCA GGCCTCCGCC
CTGCGCCGTG GCGCACAGGT CGTCGTGGGT ACGCCCGGAC GCATCCTCGA CCATATCAAC
CGCGGCACCC TGCAACTCGG CGTCGTGCGC ATGACCGTAC TCGACGAAGC CGACGAAATG
CTCGACATGG GCTTTCGCGA GGACATCGAA CGCATCCTCA GCGAAATGCC CGAATGGGTG
CAGTCTGCGT TCTTCTCCGC CACCATGCCC GACGGCATCC TCGAACTCGC CCGCCGCTTC
CTGCGCGAAC CCGAGTTGCT GCGCGTGACG CGCCGCCAGC TTACCGTCGC CAATACGGAA
CAGGCATGGT TCGAAGTGCG GCCCTTCCGC CGCGTGGACG CCGTATGCCG AATTTTCGAC
GCCTACATTC CGCGCAAGGC CATCGTCTTC CGCGCCACCA AGCAGGGCGT CGATGAACTG
GCCGCCGCAC TCCAGCAGCG CGGCATCCTC GCCGACGCCC TGCACGGCGA CCTCAACCAG
ACCCAGCGCG AACGTGTCAT GTCCCGCTTC CGCGCCGGGG GCATCTCCGT GCTGGTCGCC
ACCGACGTGG CAGCCCGTGG TCTGGACGTT GACGACGTGG ACACCGTCAT CAACTTCGAC
CTGCCCAACG ACCCCGAGAC CTACGTGCAC CGCATAGGCC GTACTGGCCG TGCTGGACGC
ACCGGTCAGG CCTTCTCGTT CGCCGCAGGT CGCGATGTGT ACAAGTTGCG CGACATCCAG
CGCGTGACCG GGTCGCGCAT CGACCGCCGC GCCATGCCCA CCGCCGCCGA CGCCTCCCGC
GCCCGCACCG GGCAGCTGCT TGAGGAAGTC GCCGCCGGGC TTGCCAGCGC CGAGACCTCG
GCCTGCCTGC CTGTGGTGGA GAAGCTCATC GCCGAAGGCG CCGACCCGAC CCAGCTTGCC
GCCACGCTGC TGCGCATGAT CATGCAGCGC GACCGCATCG ACCTGCCGGG TGCCCGCCAG
ACCGATGACA TCGGCACCGG GCGCGTGCGC CTGTTCTTCA ACGTGGGCCG CCGTATGCGC
ATCACCCCGC GTGACCTCGT GGGCGCCATC GCCGGTGAGA CGGGCATCTC CGGCCGTTCC
ATCGGTTCCA TCGAAATCCA CGACCGCTTC TCGTTCGTGG AAGTGGATGC CTCCATCGCC
CCCGAAGTGG TGTCGGTGAT GCACGGCAAC CAGATTCGCG GCTTCCGCCT CGCCGTGGAA
CAGGCAAGCC CCCGTGAGGG TCAGGACCGC GCCGCGTAA
 
Protein sequence
MESVESFKDL PLEEELLKAI EELGFTEPSP IQSIAIPRLL EGRDVIGQAQ TGTGKTAAFG 
LPLLQRIDAA DRSVQALVLC PTRELALQVA NGLTALAKHL RGVRILSVYG GQPIEPQASA
LRRGAQVVVG TPGRILDHIN RGTLQLGVVR MTVLDEADEM LDMGFREDIE RILSEMPEWV
QSAFFSATMP DGILELARRF LREPELLRVT RRQLTVANTE QAWFEVRPFR RVDAVCRIFD
AYIPRKAIVF RATKQGVDEL AAALQQRGIL ADALHGDLNQ TQRERVMSRF RAGGISVLVA
TDVAARGLDV DDVDTVINFD LPNDPETYVH RIGRTGRAGR TGQAFSFAAG RDVYKLRDIQ
RVTGSRIDRR AMPTAADASR ARTGQLLEEV AAGLASAETS ACLPVVEKLI AEGADPTQLA
ATLLRMIMQR DRIDLPGARQ TDDIGTGRVR LFFNVGRRMR ITPRDLVGAI AGETGISGRS
IGSIEIHDRF SFVEVDASIA PEVVSVMHGN QIRGFRLAVE QASPREGQDR AA