Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0070 |
Symbol | |
ID | 4664116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 83815 |
End bp | 86835 |
Gene Length | 3021 bp |
Protein Length | 1006 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639818263 |
Product | putative delta-1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_965521 |
Protein GI | 120601121 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGC AACATCTCGA CGGCAAGGTC GTCGAGCGCG GCAAAGAGTT CTTCAGAAGC ATCAGCGGCG AGGCCCCCTC CATCTTCAAC AAGGGATGGT GGACCGGTAA GGTCATGGAC TGGGCCATGC AGAACGAGGA CTTCAAGGTG CAGCTGTTCC GCTTCGTGGA CGTGCTGCCC TACCTCAACA CCTCCGAATC ACTCCTGCGG CACATCCGCG AGTACTTCGC CACAGAAGAC GCCGACATCC CCCCCGTACT CAAGTGGGGC GCGGGCAAGG CGGGCATCGG CGGGGCACTC ACCGCCAAGC TCATGGGCAT GACCATCCGC TCCAACATCG AGGGCATGGC GCGCCAGTTC ATCATCGGCG ACAACAGCAA GGAAGCCGTG AAGGGCCTTG CGAAGCTTCG CAAGGACGGC TTCACCTTCA CTGTCGACCT TCTCGGCGAA GCCACCGTCA GCGAAGAGGA ATCCGAAGCC TACGCGCAGG GCTACCACGA AGTGGTCGAC GCCATCGCCC GTGAACAGGA GAAATGGAAG GCGCTGCCCG GCAACGGCCC GGTGGAGGGC TTCGACTGGG GTGCCACACC CAAGGTCAAC GTCTCCATCA AGCCTTCGGC CCTCTACTCG CAGGCCAAAC CCGTCGACGT GGAAGGCTCG GTGCGCGGCA TCCTCTCGCG TCTTGTGCCC ATCTACCGCA AGGTGGTGGC CATGGGCGGC TTCCTGTGCA TCGACATGGA GCAACTCAAA TACAAGGAGA TGACGCTGGA GCTTTTCAAG CGCCTGCGTT CCGACCCAGA ATTCCGCCAC TACCCGCATC TTTCCATCGT GTTGCAGGCC TACCTGCGCG ATACCGAGAA GGACCTTGAA GACCTGCTGC ACTGGGCACG CAGCGAGAAG CTGCCCATCG GCATCCGCCT CGTGAAAGGC GCGTACTGGG ACTACGAGAC CGTCATCGCC AAGCAGAACG GCTGGGAGAT TCCGGTCTGG ACGGACAAGC CCGAGTCGGA CATCGCCTAC GAGAAGCTGG CGCACCGCAT CCTCGAGAAC AGCGACATCG TGTACTTCGC CTGCGCGTCG CACAACGTGC GCACCATCGC CGCCGTCATG GAGACGGCCC TCGCGCTGAA CGTGCCCGAA CACCGCTACG AGTTTCAGGT GCTCTACGGC ATGGCAGAAC CCGTGCGCAA GGGCCTCAAG AACGTGGCGG GGCGCGTGCG CCTGTACTGC CCCTACGGTG AACTCATCCC CGGCATGGCC TACCTCGTGC GCCGTCTGCT GGAGAACACC GCCAACGAGT CGTTCCTGCG GCAAAGCTTC GCCGAAGGGG CCGCCCTCGA GCGTCTTCTG GAGAACCCGC AGAAGACCCT GCACCGCCTG CTTGCAGCAC GGCCCGACCC CCGCGCCGTC GAACCGGGGC CCGGCGGTCT GCCGCCCTTC ACCAACGACG CCATGATCGA CTTCACCGTG CCCGACAACC GCAAGGCCTT CGTCGAGGCA CTGGCCGACG TGCGCTCGCG CTTCGGGCAG ACGGTGCCGC TGTACATCGG CGGGCGCGAC GTGACCACCG CAGACCTCAT CCCCACCACC AACCCGGCGA AGCCCGCAGA GGTGGTCGCC TCCATATGCC AGGCCGGACG GCCGGAAATC GACGACGCCA TCGCCGCCGC GAAGAAGGCG GCACTCACAT GGCGCGACAC GTCGCCCGCC GACAGGGCCG CCTACCTGCG TCGTGCCGCC GACATCTGCC GCAAGCGCAT CTGGGAACTT TCGGCATGGC AGGTCGTCGA GGTGGGCAAG CAGTGGGACC AGGCCTACCA TGACGTGACC GAAGGCATCG ACTTCCTCGA ATACTATGCG CGTGAGATGC TGCGCCTTGG CGCACCCCGG CGCATGGGGC GCGCCCCCGG CGAGCACAAC CACCTGTTCT ATCAGCCCAA GGGCATCGCG GCGGTCATCG CCCCGTGGAA CTTCCCGTTC GCCATCGCCA TCGGCATGGC TTCGGCAGCC ATCGTCACGG GCAACCCCGT CATCTTCAAG CCCTCGTCCA TCTCGTCGCG CATCGGTTAC AACCTTGCCG AGGTCTTCCG CGAGGCGGGG CTTCCCGAGG GCGTGTTCAA CTACTGCCCC GGCCGCAGTT CCATCATGGG CGACTACCTC GTCGAACACC CAGACATCAG CCTCATCTGC TTCACGGGCT CCATGGAAGT GGGCCTGCGC ATTCAGGAGA AGGCCGCGAA GGTGCAGCCC GGGCAGCGGC AGTGCAAGCG CGTCATCGCC GAGATGGGCG GCAAGAACGC CACCATCATC GACGACGACG CCGACCTCGA CGAGGCCGTG TTGCAGGTGC TGTACTCCGC CTTCGGCTTT CAGGGGCAGA AGTGCTCGGC CTGCTCACGG GTCATCGTTC TCGACGCCAT CTACGACCGC TTCATCGAAC GGCTGGTGAA GGCCGCCTCG TCCATCCACA TCGGCCCATC CGAAGACCCG TCCAACTACA TGGGCCCTGT GGCTGACGCC ACCTTGCAGA AGAACGTCAA CGACTACATC CGCATCGCCG AAGAAGAGGG CAGGGTGCTG CTCAAGCGCA CCGACCTTCC CGCCGAAGGC TGCTACGTGC CGCTGACCAT CGTGGGCGAC ATCCGGCCCG AACACCGCAT CGCGCAGGAG GAGATTTTCG GCCCTGTGCT TGCCGTCATG CGTGCCGCAA CCTTCGATGA GGCCCTCTCC ATCGCCAACG GTACGCGCTT CGCCCTGACG GGTGCCGTCT TCTCACGCAG CCCCGAACAC CTCGACAAGG CGCGCCGCGA ATTCCGCGTG GGCAACCTCT ACCTCAACAA GGGCTCCACC GGGGCGCTTG TCGAGCGTCA GCCCTTCGGC GGCTTCGCCA TGTCCGGCGT GGGCTCCAAG ACGGGCGGGC CCGACTACCT GTTGCAGTTC ATGGACCCGC GCGTGGTGAC GGAGAACACC ATGCGTCGCG GTTTCACCCC CATCGACGAG GACGACGACT GGATCGTCTA G
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Protein sequence | MDQQHLDGKV VERGKEFFRS ISGEAPSIFN KGWWTGKVMD WAMQNEDFKV QLFRFVDVLP YLNTSESLLR HIREYFATED ADIPPVLKWG AGKAGIGGAL TAKLMGMTIR SNIEGMARQF IIGDNSKEAV KGLAKLRKDG FTFTVDLLGE ATVSEEESEA YAQGYHEVVD AIAREQEKWK ALPGNGPVEG FDWGATPKVN VSIKPSALYS QAKPVDVEGS VRGILSRLVP IYRKVVAMGG FLCIDMEQLK YKEMTLELFK RLRSDPEFRH YPHLSIVLQA YLRDTEKDLE DLLHWARSEK LPIGIRLVKG AYWDYETVIA KQNGWEIPVW TDKPESDIAY EKLAHRILEN SDIVYFACAS HNVRTIAAVM ETALALNVPE HRYEFQVLYG MAEPVRKGLK NVAGRVRLYC PYGELIPGMA YLVRRLLENT ANESFLRQSF AEGAALERLL ENPQKTLHRL LAARPDPRAV EPGPGGLPPF TNDAMIDFTV PDNRKAFVEA LADVRSRFGQ TVPLYIGGRD VTTADLIPTT NPAKPAEVVA SICQAGRPEI DDAIAAAKKA ALTWRDTSPA DRAAYLRRAA DICRKRIWEL SAWQVVEVGK QWDQAYHDVT EGIDFLEYYA REMLRLGAPR RMGRAPGEHN HLFYQPKGIA AVIAPWNFPF AIAIGMASAA IVTGNPVIFK PSSISSRIGY NLAEVFREAG LPEGVFNYCP GRSSIMGDYL VEHPDISLIC FTGSMEVGLR IQEKAAKVQP GQRQCKRVIA EMGGKNATII DDDADLDEAV LQVLYSAFGF QGQKCSACSR VIVLDAIYDR FIERLVKAAS SIHIGPSEDP SNYMGPVADA TLQKNVNDYI RIAEEEGRVL LKRTDLPAEG CYVPLTIVGD IRPEHRIAQE EIFGPVLAVM RAATFDEALS IANGTRFALT GAVFSRSPEH LDKARREFRV GNLYLNKGST GALVERQPFG GFAMSGVGSK TGGPDYLLQF MDPRVVTENT MRRGFTPIDE DDDWIV
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