| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0058 |
|---|
| Symbol | |
|---|
| ID | 4663479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 73526 |
|---|
| End bp | 74875 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639818251 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_965509 |
|---|
| Protein GI | 120601109 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTC ACGCCGACCT CGACGTGCTC ATCGTCGATG ATGACGAAGC CATCGTCCGC
ACCTTGCTCA TCGGGCTGAA GGGCATGGGG TGCAGGACAC GGGGGGCACA CTCCCCTTCC
GCCGCACTCG AGACCCTTCG CAGGCATCCT GCCGACCTCG TCCTCACGGA CATGCGCATG
GAAGAGAGGA CGGGGGTCGA CCTCATCCGC GAGGTCTCCA TGCTGTACCC GCATACGGTC
TGCGTCATCA TGACCGCGTT CGCAAGCTAC GAGAACGCCG TCGCCGCCAT CAAGGCGGGA
GCCTTCGACT ATATGCCCAA ACCCTTCGGC ATGGACCAGC TGCAGCACCT TGTCCGGAAG
GTCTCGACGC TCATCGGACT CCGGCGCGAG AACGCCCGCC TGCGGGACGA GGCGGCGCCC
GACTGGTTCT CCGGGCTCAC CTCCCCGGCG AGTCGCGCCC TTGAAGGGCT CATAGACCGC
ATCGCACCCA CGGACGCCAC GATGCTCTTC ACCGGCGAGA CGGGCACCGG AAAGACCGAA
CTGGCACGGA CGCTTCACCG CAGGTCGCAC CGGGCTGCCA GGCCCTTCGT GGAGGTGACC
TGCACCACCA TCGCCGAAAC CCTCTTCGAG TCCGAGGTGT TCGGTCATGC GCGGGGCGCT
TTCACCGGGG CGGTGAAGGA CCACGCGGGC AAGTTCGAAC AGGCGAACGG GGGAACGCTC
TTTCTGGACG AGGTCGGCGA CCTCGCCCCT GCGATGCAGT CGAAACTGCT CCGTTTTCTC
GACGACAGGG TCATCGAGCG CGTGGGCGGC AGCGCGGGCA TCGAACTCGA TGTCCGGGTG
ATAGCCGCCA CCAACCGTGA CCTGACGCAG ATGGTGGCGG AGGGAACGTT CAGGGAAGAC
CTGTACTATC GGCTCAACAC GTTCGAATGC CACATCCCGC CCTTACGTGA ACGGCGCGAG
GACATCCCCC CGCTGGCGAC ACGCCTGCTG CACCGGGCCC TCGTCCGCTA CCCGTCCGAA
CACCCTCCGG TGATCACCGA AGAGGTCTTG CATCTGCTCA TGTCACACGA CTGGCCCGGC
AATGTGCGTG AACTGCGCAA CGTCATGGAA CGCGCCACAC TGCTCTGTGC CGGAGGGCCC
ATCACGTCGT CCCATCTTCC CCCTGCCCTT GTCGCCGGAG AGGGTGCCGT AGCTACGGTG
AAGGACGGCA TCCCTTCACT CAGGGAGGTG GAGGAGGCAC ACATCCGCAA GGTGCTCGGC
ATGGGCTTCA GCATGGAGCG TGCCGCAGAC GTTCTGGGCA TCACCACGGT CACCCTCTGG
CGCAAGCGCA AGGAGATGGG AACGACCTGA
|
|---|
| Protein sequence | MTPHADLDVL IVDDDEAIVR TLLIGLKGMG CRTRGAHSPS AALETLRRHP ADLVLTDMRM
EERTGVDLIR EVSMLYPHTV CVIMTAFASY ENAVAAIKAG AFDYMPKPFG MDQLQHLVRK
VSTLIGLRRE NARLRDEAAP DWFSGLTSPA SRALEGLIDR IAPTDATMLF TGETGTGKTE
LARTLHRRSH RAARPFVEVT CTTIAETLFE SEVFGHARGA FTGAVKDHAG KFEQANGGTL
FLDEVGDLAP AMQSKLLRFL DDRVIERVGG SAGIELDVRV IAATNRDLTQ MVAEGTFRED
LYYRLNTFEC HIPPLRERRE DIPPLATRLL HRALVRYPSE HPPVITEEVL HLLMSHDWPG
NVRELRNVME RATLLCAGGP ITSSHLPPAL VAGEGAVATV KDGIPSLREV EEAHIRKVLG
MGFSMERAAD VLGITTVTLW RKRKEMGTT
|
|---|
| |