| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0032 |
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| Symbol | |
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| ID | 4663097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 47604 |
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| End bp | 49127 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639818225 |
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| Product | NusB/RsmB/TIM44 |
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| Protein accession | YP_965483 |
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| Protein GI | 120601083 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTC TGACCTCCGA CCTTCCCTGC CCGCAACCGG GCGTCCTCTT CCCGGACTTC
GCCCCGGTGT TGCGAGACCG CAAACGCCTG TCGTGCGTCC CCCCTGCACG TGCCGGTGCA
CTCGTCGCAC TGGATGCCGT CGTGCGCGCC GGTGTCGATG TGCAGGCCGC CCTAGACGAC
TCTCTGTCGC ATGCCTCTCT TTCGCGTCAG GATGCCGCGC TCTGCACGGA GCTTGTCTAT
GGCTATCTCA GGTCGGAAAT TCGTCTTTCA TGGCTTGTAC GGCGTTTTCT GAAGGCCCCT
TCGAAGCTGC CCCCCGGCGT TCTGGCATTG CTCTGCCTTG CCGCCTACGA ACTCACCCAG
TGTGACAGGG TGCCTGCGTA TGCCACCCTC GACTGGGCCG TATCCGCTGT CAGGGCACTC
TATGGCACGG GTGTCTCACG CCTTGCCAAT GCAGTGCTGC GCAATGTGGA CCGGCTGGGC
GATGTGTGGC GCGTAGCCGA CTTCTATGCG TGTGTCGCCG ATAACCGCGA CAGGCTGTGT
GTAAGGCACT CCGCCCCGCG CTGGCTTGTC GACCTGTGGT GCGACGGATA CGGCGAGGAG
AAGGCGACAG CCCTGCTGGA GGCCTCGCTG CTGCATCCCG CACCGGGCCT ACGCATCAAC
CTCGCCCGTG CTGACGGTGC GGATTGTCTG CAACAACTCC TTTCCGGCAA CGTCGGGACA
GGTAGGCAGG CTGCTGGAAA GGCCGGTGTC GTGTTCACCT CCGGAGGCAC ACCTTCCGAG
GTGACTTCAC TCGTATCCGA GGGACGGGCT TCCCGGCAGA GTGGTGCTTC GCAGTCGGCC
CTTGCGGCAC TTGAACCCGA GGTATGGCCG GGTCCCGTAT GGGACTGCTG TTGCGGACGG
GGTGGGAAGA CTGCGGCGCT TGTTGAAACC GGGGTTGCGG TCGTTGCTGC ATCAGACCCC
AGTATGAGCC GTCTGCGGGG GTTGCGCCGC GATTTCGCAA GACTCGGTCT TCCGGTGCCG
CTTGCGGTGC GTGCCTCTGC TGTGCGCCCG CCTTTCAGTT GCGCCGCCAG CATGGCCCGG
GCCGGGAGTT GTGGCGATGG CGGCAGCCCG CTTGCCATTG ATGGCATTGA AGTGGAGGTG
TCCCGTGGGC AATCCGCGAC AGGGCTTGTC AACGCCTCTG GGCTGGGCAG CGGTGGTCTT
TTCGGTACCA TCCTTGTGGA TGCCCCGTGC AGTGGGCTTG GCACGTTAAG CCGCAGGCCC
GACATCAAGC GTAAGCGAAC CACGGCACAG ATTGCGGAAC TTGTTGCCCT TCAAGAGGCC
ATTCTCGATG CCGTCTGGCC CTGTCTGCGT TCAGATGGCG TACTCGCCTA CATAACGTGT
ACCCGCAATC CGCAAGAAAA CGAGTTGCGG ATTGCGGCAT TTCTTGAACG TCATCTGGAT
GCGAGACTTG AAATCGCGTA CGAGACACCC CTTGAGGATG TCTCGCGCGA ATTCTTCTAT
GCAGCCCGGT TGAGGAAGGC TTAG
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| Protein sequence | MTSLTSDLPC PQPGVLFPDF APVLRDRKRL SCVPPARAGA LVALDAVVRA GVDVQAALDD
SLSHASLSRQ DAALCTELVY GYLRSEIRLS WLVRRFLKAP SKLPPGVLAL LCLAAYELTQ
CDRVPAYATL DWAVSAVRAL YGTGVSRLAN AVLRNVDRLG DVWRVADFYA CVADNRDRLC
VRHSAPRWLV DLWCDGYGEE KATALLEASL LHPAPGLRIN LARADGADCL QQLLSGNVGT
GRQAAGKAGV VFTSGGTPSE VTSLVSEGRA SRQSGASQSA LAALEPEVWP GPVWDCCCGR
GGKTAALVET GVAVVAASDP SMSRLRGLRR DFARLGLPVP LAVRASAVRP PFSCAASMAR
AGSCGDGGSP LAIDGIEVEV SRGQSATGLV NASGLGSGGL FGTILVDAPC SGLGTLSRRP
DIKRKRTTAQ IAELVALQEA ILDAVWPCLR SDGVLAYITC TRNPQENELR IAAFLERHLD
ARLEIAYETP LEDVSREFFY AARLRKA
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