Gene Dvul_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0030 
Symbol 
ID4662624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp45337 
End bp46329 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID639818223 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_965481 
Protein GI120601081 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA GCGCGCCGCT CAAGATAGTC TTCATGGGCA CGCCGGACTT CGCTGCGGCG 
AGTCTCCGGC ATCTTCTCGC GTGGGACGGA TGTGACGTCG TCGGCGTGTA CACGCAGCCC
GACCGTCCTT GCGGGCGTGG GCAGCAGTGC CGGCCCTCTG CCGTGAAGAT GCTCGCCCTC
GAGCACGGTC TCGACGTGCG GCAGCCCGTG AACTTCCGTG ACGAGGCGGA TGTGCAGGCC
CTTCGTGACT TCGGGGCCGA CATCCTCGTG GTCGCCGCCT ACGGCCTCAT CCTGCCGCAA
TCGGTGCTCG ATGCCGCGCC CATGGGGGCC GTCAACGTAC ACGGTTCGCT GCTGCCCCGC
TACCGTGGCG CCGCGCCCAT CCAGAGGGCC GTCATGAACG GCGACGCGGT CACGGGCATC
ACCATCATGC AGGTGGTCAA GCAACTCGAC GCAGGCCCTA TGCTGCTGCA GAAGGCCCTC
GGCATCGGCT GCGACGAGAC GTCAGGACAG TTGCACGACC AGCTTGCCGA GTTGGGCGGG
CGATTGCTTG TGGAAACGCT GGCGCGCCTC AGGGCGGGGA CCATCATGCC GATCCCGCAG
GACGACGCCC TCGCCACCTA TGCCGCCAAA CTCACCAAGG CCGACGGCCT CGTGGACTGG
AACCGCACTG CGGTCGAGGT CCATGCACAG GTGCGCGGCG TGACACCGTG GCCTGCCGCG
TACTTCACGC TTCGGCGCGA AGGGCAGAAG GACGTGCGCG TCACCATCGA ACCCGGCACC
ATCGGGCCGC TGCTTGAGCA GCCTGCCGTA CCCGGCACCA TCGTCGGGCT TGTGGACGGT
GCCATCGCCT TCGCCTGTGC CGACCGCACC TACCTCGTGC GCACCATCCG TCCTGCCGAC
AAGAAGCCCA TGACAGGCGA GGCGTTCTGG TGCGGCTATC TCAGTCGCTG CGAGGGCGAA
TGCCCCGGCT TTGCCGTCTG CGAAGGTGCC TAG
 
Protein sequence
MAESAPLKIV FMGTPDFAAA SLRHLLAWDG CDVVGVYTQP DRPCGRGQQC RPSAVKMLAL 
EHGLDVRQPV NFRDEADVQA LRDFGADILV VAAYGLILPQ SVLDAAPMGA VNVHGSLLPR
YRGAAPIQRA VMNGDAVTGI TIMQVVKQLD AGPMLLQKAL GIGCDETSGQ LHDQLAELGG
RLLVETLARL RAGTIMPIPQ DDALATYAAK LTKADGLVDW NRTAVEVHAQ VRGVTPWPAA
YFTLRREGQK DVRVTIEPGT IGPLLEQPAV PGTIVGLVDG AIAFACADRT YLVRTIRPAD
KKPMTGEAFW CGYLSRCEGE CPGFAVCEGA