Gene Dvul_3084 details

Gene Information

• Locus tag: Dvul_3084
• ID: 4661920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris DP4
• Kingdom: Bacteria
• Replicon accession: NC_008741
• Strand: +
• Start bp: 175337
• End bp: 176029
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639814004
• Product: ABC transporter related
• Protein accession: YP_961283
• Protein GI: 120586938
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.319445
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCATGG AAGCCAGAAC CCTCCTTGAA GTGCACGGCG TGAGCATGGT CTTCGGCGCC 
GGAGAGAACG CACAGTACGC CCTGCGCGAC GTGCATCTCT CGGTGCGCGA CGGCGAGGTG 
CTGATGCTGC GCGGCCCCTC CGGCAGCGGC AAGACCACCC TGCTGTCCAT CATGGGCGGC 
ATCCTCTCCC CCACCGAGGG CACGCTGACC GTGGACGGCA CCCCCATGAC CGGTCTTTCG 
GCCGAGGCGC GTTCGGCCCT GCGGCTGAAG CACTTCGGCT TCATCTTCCA GGACTACAAC 
CTCTTCCCCA CGCTGAACTG TTCACAGAAC ATACAGGTGG CCCTCGACCT GCGCGGCGTG 
CCGCGTGACG AGGCAAGGCG CATCGCCGAC GCCACCCTCG GCGAGGTGGG GCTTGGCGGC 
AAGGTGGGCG AGATGCCCGC GCGACTCAGC GGCGGGCAGA AGCAGCGGCT GGCGGTGGCG 
CGCGCCCTTG CGGGGTCGCC CATGGTGATG CTGGCCGACG AACCCACGGC GGCCCTCGAC 
TCCACCAACG GGCTGATGAT CATGTCGCTG TTGCGCGACC TCGCGCACGC GGGCGGGCGG 
GCGGTGGTGG TGGTCACCCA CGACGACCGC ATCATGCCCT TCGCAGACCG TGTGGTGCAC 
ATCGAAGACG GAAGGATCAA GGAAACGGAG TGA 

 

Protein sequence

MPMEARTLLE VHGVSMVFGA GENAQYALRD VHLSVRDGEV LMLRGPSGSG KTTLLSIMGG 
ILSPTEGTLT VDGTPMTGLS AEARSALRLK HFGFIFQDYN LFPTLNCSQN IQVALDLRGV 
PRDEARRIAD ATLGEVGLGG KVGEMPARLS GGQKQRLAVA RALAGSPMVM LADEPTAALD 
STNGLMIMSL LRDLAHAGGR AVVVVTHDDR IMPFADRVVH IEDGRIKETE