Gene Dvul_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2974 
Symbol 
ID4661893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008741 
Strand- 
Start bp34111 
End bp34749 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID639813894 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_961173 
Protein GI120586828 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.948346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCA CCGAAGACGA CCTCCTTCCC ATATCCGCCT TGCAGCATCT GCTCTACTGC 
GAGCGGCAAT GTGCGCTCAT CCATATCGAG CGGGTATGGG AGGAGAATCT GTTCACGACG 
GACGGTCGCA TCCTTCACGA GAAGGCCGAC GCCGGGGAGG ACTGCGTGCG TGCCGGAAAG 
CGCATCGCAC GCAGTGTTCC CCTGCGTTCG CTGCAACTCG GCCTGTCCGG GGTCGCCGAC 
GTGGTCGAGT TCGGCCCGGA CGCCGGGGAT GTCTACCCCG TCGAATACAA GCGAGGCCGC 
AGCAAACGCG CCAACTGGGA CAGAATCCAG CTTTGCGCCC AGGCTTTGGC CCTTGAAGAG 
ATGCTCGGCG TGCCGGTCAC AGAGGGCGCG CTCTTCTACG GCAAGACCAG ACGGAGAGAG 
GCTGTCGCCT TCGATGCCGC CTTGCGAGAC GAAACACGCA GGGCGGCGGC ACGCCTGCAT 
CAGCTTGTCG ATGCCCGGCT GACACCCCCG GCCCACTATG AGGCATCAAG ATGTGACGCA 
TGCTCACTGA TCAACCTGTG TATGCCGAGG CTTCCGGGAA AGACGAACGT CAGGAAGTAT 
CTGGCTGCCA TGGCGGAAAT CGATGAAGAA ACTGCTTAA
 
Protein sequence
MAFTEDDLLP ISALQHLLYC ERQCALIHIE RVWEENLFTT DGRILHEKAD AGEDCVRAGK 
RIARSVPLRS LQLGLSGVAD VVEFGPDAGD VYPVEYKRGR SKRANWDRIQ LCAQALALEE 
MLGVPVTEGA LFYGKTRRRE AVAFDAALRD ETRRAAARLH QLVDARLTPP AHYEASRCDA 
CSLINLCMPR LPGKTNVRKY LAAMAEIDEE TA