Gene Maqu_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_3834 
Symbol 
ID4655309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand+ 
Start bp4253481 
End bp4254566 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content63% 
IMG OID639813811 
Producthistone deacetylase superfamily protein 
Protein accessionYP_961090 
Protein GI120556739 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAC CTGTGCCAGA GTGCTTCCAC GTTGATATCA AGGACCCGCG CCCTATGAAA 
ACCGTCTTCT CCCCGTTGCA CAGCCGGCGC CATGTACGCA CCGAACTGGA TGGCGGCCTG 
CTGATCGAAC CCCATGAAAA ACCCTCAAGG GCCGAGACCA TCCTGGCCAG GGTGAAAGAC 
CAGGCCCTGG GCGAGATTCT GGAGCCGGAA GAATTCGGGC TGGCGCCGAT CCAGCGCGTG 
CACACACCGG ATTACGTGGC GTTTCTGGAG ACCTGCTGGC AGGACTGGCT GGCTGCGGGC 
AAGCCCGGCG AAGCCATTCC CGCGGTGTGG GCAGGCCGGG GCATGCGCCA CCGGATTCCC 
AAGGACATTG ATGGCCGCCT GGGCTATTAC AGCTTTGCCG CCGAAACCTC GATCTCGGAG 
GGCACCTGGG AAGCCGCCCG CGCTTCCGCC AACGTGGCCC TGACCGCCCA GAAACTGGTG 
GCCGATGGTG AGCGCGCTGC CTTTGCCCTG TGCCGACCAC CCGGGCACCA CGCCCACGCC 
GACCTGTTCG GCGGCTACTG CTTCTTCAAC AACGCAGCTA TCGTGGCGCA GGCGTTCCGG 
GACCAGGGCT ACGGCAAGGT TGCTATCCTG GATGTGGATT TCCATCACGG CAATGGCACC 
CAGGCCATTT TCTATGACCG GGCCGATGTC CTCACTATCA GCCTGCACGG CGACCCGGAT 
CTGGTGTTCC CGCACTTCCT AGGGTTTGAA GACGAGCTGG GGGAAGGCAC CGGCGAAGGC 
TACAACCTGA ACATCGTCTA TCCGCCGGGA ACGCCCTACA GCACCTGGAG CCAAGGCCTG 
GAAACCGCTT GCGAGCGCAT TGAAGTGTTC AAGCCCGATG CCCTGGTGGT GGCGCTGGGC 
GTGGACACCT TCGAGCACGA CCCCATCTCG TTCTTCAAGC TGGCCTCGGA AGACTACCTC 
AGCCTGGGGC AGCGCCTGGC GCAGCTGGGT TTGCCCACCG TGTTTACCAT GGAAGGCGGC 
TACGATGTGG ACGCCATTGG CGTAAATGCG GTCAATGTCA TGCAGGGCTT TGAGGGAAAA 
TCCTGA
 
Protein sequence
MHKPVPECFH VDIKDPRPMK TVFSPLHSRR HVRTELDGGL LIEPHEKPSR AETILARVKD 
QALGEILEPE EFGLAPIQRV HTPDYVAFLE TCWQDWLAAG KPGEAIPAVW AGRGMRHRIP 
KDIDGRLGYY SFAAETSISE GTWEAARASA NVALTAQKLV ADGERAAFAL CRPPGHHAHA 
DLFGGYCFFN NAAIVAQAFR DQGYGKVAIL DVDFHHGNGT QAIFYDRADV LTISLHGDPD 
LVFPHFLGFE DELGEGTGEG YNLNIVYPPG TPYSTWSQGL ETACERIEVF KPDALVVALG 
VDTFEHDPIS FFKLASEDYL SLGQRLAQLG LPTVFTMEGG YDVDAIGVNA VNVMQGFEGK 
S