Gene Maqu_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_3564 
Symbol 
ID4656813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand+ 
Start bp3941897 
End bp3942571 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID639813541 
ProductDNA repair protein RadC 
Protein accessionYP_960820 
Protein GI120556469 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.469153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATT CCAGCTGGCC CACCGACGAG CGGCCCAGAG AGCGCCTGCT CGCCCATGGC 
GCCCAATCCC TGTCTGACGC CGAATTACTG GCCATTTTTC TGCGCACCGG CACGACCGGC 
ATGCCGGTGA TGGCGCTGGC ACGACACCTG ATTGACGAAT TCTCCGGCCT GCGGGGACTG 
ATGACCGCCT CCCGCCGGCA GTTTCTGCAA GTGAAAGGCC TGGGTACCGC CAAGTACGCC 
CAGGTGCAGG CCGCCATGGA AATGGCCCGG CGGGTCATGG ACGAACCCCT GCGCCAGGGT 
GATCCGCTGC GCTCACCGGC AGACACCCGG CGCTTTCTCA CCAGCCGGCT GGGCACCTAT 
CCCCACGAAG TATTCGCCGG ACTGTTCCTG GACAACCGCC ACCGGGTCAT CCAGTACCGG 
GAGCTTTTCC GGGGCACCAT CGACGGCGCC GCAGTGTATC CGAGGGAAGT GGTGCGCCAG 
GCCCTGGAAG ACAACGCCGC AGCCGTCATT TTCGCCCACA ACCACCCCAG TGGCGTGGCC 
GAGCCCAGCC AGGCCGACAT TTCCCTGACC CGCAGATTGA AGGAAGCGCT GGGATTGGTG 
GATATCAGGG TTCTTGACCA TATGGTTATC GGCCACGGTG AGGTAATATC GCTGGCTGAA 
CGAGGGTTGA TGTAA
 
Protein sequence
MTDSSWPTDE RPRERLLAHG AQSLSDAELL AIFLRTGTTG MPVMALARHL IDEFSGLRGL 
MTASRRQFLQ VKGLGTAKYA QVQAAMEMAR RVMDEPLRQG DPLRSPADTR RFLTSRLGTY 
PHEVFAGLFL DNRHRVIQYR ELFRGTIDGA AVYPREVVRQ ALEDNAAAVI FAHNHPSGVA 
EPSQADISLT RRLKEALGLV DIRVLDHMVI GHGEVISLAE RGLM