Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_3448 |
Symbol | |
ID | 4657123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 3810541 |
End bp | 3811539 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639813427 |
Product | nifR3 family TIM-barrel protein |
Protein accession | YP_960706 |
Protein GI | 120556355 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCAA CGGCAAAAAT CGGGCCGTAC ACCCTGCCCA ACCCGCTGAT TGTTGCACCC ATGGCCGGTG TAACCGATCG CCCTTTCCGG CTTTTATGCC GACGAATGGG GGCCGGGCTG GCGGTATCGG AAATGGTCAT AGCGGACAGC AAGCTCTGGC ATACGCGTAA ATCCCGGACT CGCCTGAATC ACGAAGGCGA ACCGGAACCC AGATCGGTCC AGATCGCCGG CGGCGACCCC GAGATGCTGG CCGACGCCGC CCGGCAAAAC GCTGAATTCG GTGCTCAGAT CATCGACATC AACATGGGAT GTCCGGCCAA GAAAGTCTGC AACAAGGCCG CCGGTTCGGC CCTGATGAAA GATGAGAAGC TGGTGCGGGA AATTCTGGAA GCCGTGGTGA AGGCGGTAGA TGTGCCGGTG ACCCTGAAAA TGCGAACCGG CTGGGACAGA GACAACCGCA ATGCTCCGGT CATCGCCAGG ATGGCGGAAG ATGCCGGCAT TCAGGCTCTG GCCGTACACG GCCGTACCCG CGCAGACAAA TACAACGGCG ACGCGGAGTA CGACACCATC GCAGAGGTCA AGGCCAGCGT TGGCATTCCG GTGTTCGCCA ACGGCGACAT TACCACGCCG GAGAAGGCCC GGCAGGTACT CAGCCATACC GGTGCCGACG GCTTGCTGAT TGGCCGGGGT GCCCAGGGCC GGCCCTGGAT TTTCCGGGAG ATTCTTCATT ATCTGGAAAC CGGAGAGCAC CTGCCACAAC CGCCCATGGA TGAAGTGGAG CGGATTCTGG CCGGGCACCT GGAAGAACTG CACCGTTTCT ACGGCGAATT GATGGGCGTG CGTATCGCCA GAAAACACGT GGGCTGGTAT CTGCAGTCCC ATGATGACAG CAAACAGTTC CGACAACGCT TCAACGCCAT CGATGATGCG CTGGAGCAGA AAGACAGCAT CGCACAGTAT TTTGCAGGCT TACGAAATGG AGAGGTATTC GCAGCATGA
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Protein sequence | MLPTAKIGPY TLPNPLIVAP MAGVTDRPFR LLCRRMGAGL AVSEMVIADS KLWHTRKSRT RLNHEGEPEP RSVQIAGGDP EMLADAARQN AEFGAQIIDI NMGCPAKKVC NKAAGSALMK DEKLVREILE AVVKAVDVPV TLKMRTGWDR DNRNAPVIAR MAEDAGIQAL AVHGRTRADK YNGDAEYDTI AEVKASVGIP VFANGDITTP EKARQVLSHT GADGLLIGRG AQGRPWIFRE ILHYLETGEH LPQPPMDEVE RILAGHLEEL HRFYGELMGV RIARKHVGWY LQSHDDSKQF RQRFNAIDDA LEQKDSIAQY FAGLRNGEVF AA
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