| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3386 |
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| Symbol | |
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| ID | 4654270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 3743900 |
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| End bp | 3747058 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639813365 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_960644 |
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| Protein GI | 120556293 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGAGG ATCAGCTGGA ACAACAATGC CTGCAATGGT TCGCCGAAGG CGGCTGGGAG
ATCGCCCACG GGCCCGATCT GGCATCGGAC GGAGAGGCCC CGGAACGGGC CGATTACCGG
CAGGTCTTGT TGCTGGCGGA TCTTGAGGCA GCGATACAGC GCATCAACCC TCACCTGCCC
CAAAGCGCTG TTGAACAAGC CGTGGCCGTG GTGCGCAAAC CCGAAAGCCT GGACGTGGTG
ATCAGCAACC GGGCCTTTCA CCGCCTGCTG CTGGACGGTG TGCCGGTGGA GTACAAGCGC
GACGACAAGG TGGTTCACGA CCAGGCCTTT CTAGTGGATT TTGGTGACCT CACCGCCAAC
CGGTTCCGGG CCATTAACCA GTTCACCATT GAGGGCTCCA AACAGCTCCG CCGGCCGGAT
GTGATTTGCT TTATCAACGG CCTGCCACTG GCCGTGCTGG AGCTGAAAAG CCCGGGCGCA
GAGAACGTGA ACATCTGGGA TGCCTACAAC CAGGTCCAGA CCTATAAAGA TGAATGCTCC
GATCTTTTTG CCTACAACGA AGCCGCCGTT ATCAGCGATG GCTATCTGGC CCGGGTTGGC
TCCCTCACCG CCAGCCAGGA GCGCTACATG CCCTGGCGCA CCCTCAGGCA CGAGGATGAC
AAGCCGTTGC TGGAATGGCA GCTGGAAACC ATGGTGCGGG GCTTCTTCGA CCGGGAGCTG
TTCCTGGATT ACATCCGCTA TTTTGTGATC TTCGAGACGG ATTCCGACAA GCTGATCAAG
AAGATTGCCG GATACCACCA GTTCCATGCG GTGTGTGAAG CGGTAAAGGC CACGGTGATT
GCCGCCCAGG CACCGGAGCA CGGGCATTGG GCCAAGGAGA AGCGCGCCAC CTACGGCGAT
GAGGTTTTGC CCGGCAGCAA GAAAGCCGGC GTGGTATGGC ACACCCAGGG CTCCGGCAAG
AGCATTTCCA TGTGCTGTTA CGCCGGCAAG CTGCTGCAAC AGCCGGAGAT GAACAACCCC
ACGCTGATTG TGGTCACCGA CCGCAACGAC CTGGACGGCC AGTTGTTTGC CACCTTCAGC
GCCGTCCGGG AATTGCTGAA GCAGGAACCG GTGCAGGCCG ATGACCGCGA CACCCTGCGT
CGGCTGCTGT CGGAACGGGA ATCCGGCGGC ATCATCTTCA CCACGGTTCA GAAGTTCGCC
CTGCTCAACG ATGAGTCCGG CCACCCGATT CTGAACGACC GCCACAACAT CGTGGTGATC
TCAGACGAAG CCCACCGCAG CCAGTACGGC CTGAAAGCCA CCCTCAAGAA GGACGGCACC
TACAAGTTCG GCTACGCCCG CCACATGCGC GATGCCCTGC CCAATGCCTC GTTCATCGGC
TTTACCGGCA CCCCCATCGA GAGCGAAGAC AAAGACACCC GGGCCGTGTT CGGCGATTAC
GTGTCGATCT ACGACATCCA GGATGCCGTG GACGATGGTG CGACCGTGCC CATCTTCTAC
GAATCCCGCC TGGCCAAACT CGACATCAAC CGCGAACAGA TCGAGGAATT GTCGGATCAG
GTGGAGGAAG TGGTTGAAGA CGACGAAGAC GTTGGCAGCC GCGAGAAAAC CAAGGGCGAG
TGGAGCCGGC TGGAGAAGCT GGTCGGCGCC GGCCCGCGCC TGAAGCAGGT GGCGGAAGAC
CTGGTAAACC ACTTTGAAAC CCGCTCCAGC ACCATAGACG GCAAGGCCAT GATTGTGGCC
ATGAGCCGGG AGATTGCGGT TCACCTGTAT AACGAGATTG TCGCCCTGCG CCCGGAATGG
CACGACGATG ATCCCGAGAA AGGCGCCATC AAGATCGTGA TGACCGGCTC CGCCTCTGAT
CGCGCGCTGC TGCAGCCGCA CATCCACAAC AAGCAGACCA AGAAACGGTT CGAGAAGCGC
TTCAAAGACA TCAACGACCC GCTCAGGCTG GTGATCGTGC GGGATATGTG GCTGACCGGC
TTCGATGCGC CCTGCTGTCA CACCATGTAT GTGGACAAGC CCATGAAGGG CCACAACCTG
ATGCAGGCCA TTGCCCGCGT AAACCGCGTG TTCAAGGACA AGCCCGGCGG GCTGGTGGTG
GATTACATCG GCATCGCCAA CGAGCTCAAG CAGGCCCTGA AAACCTACAC CGACGCTAAG
GGCAAGGGCT CACCTACCCA TAGCGCAGAA GAAGCCTACG CCATCCTGCT GGAGAAGCTG
GACATCATCC ACGGCATGTT TGCCCCCGGC CCCAAAGGTA AGGGCTTCAG CTATAGCGGT
TTTGACACCG AGCCCCGCAA GGTTCTGCTG GCCACCGCGA ACTATGTGCT CAGCCTGGAA
GACGGCAAAA AGCGCTTCTT GGATACCGTG CTGGCCATGA ACAAAGCCTT CTCCCTGTGC
GCCACCCTGG ACGAAGCCCA AACGCTTCAG AAGGAGGTGG CGTTCCTGTC GCAGGTGAAG
ACGGCCATCA CCAAGTTCAC CAGCGTAGAC AAGAAGCTGA CTGAGGAAGA GAAGAACACG
GCGCTGCGGC AGATCCTGAA CAACGCTCTC ATCGCCGAAG GGGTTACCGA TGTCTTCGCC
CTGTGCGGCC TGGACAAGCC CAACATCGGC CTGCTCTCTG ACGAGTTCCT GGAAGACGTT
CGGCAAATGC CCTACAAGAA CTTCGCCGTG GAACTCCTGG AGAAGCTGCT CAAGGACGAC
ATCAAGGCCA AGACCCGCAA CAACGTAGTA CAGGAGAAGA AGTACGCCGA CCGCCTGCAG
GAGACGCTGC GCAAGTACAA CAACCGGGGC ATCGAGACAG CCCAGGTGAT CGAAGAGCTG
ATCGCCATGG CCAAGCAGTT CCAGGCTGAA ATGGAGCGGG ATGCCGCCCT CGGTCTGAAC
CCGGACGAAG TGGCCTTCTA CGACGCCCTG GCCAGCAATG AAAGCGCCGT GCGGGAGCTG
GGCGACGAGA TCCTGAAGAA GATCGCCGTG GAGATCACCG ACAAGCTGCG CAAATCCACC
ACCGTGGACT GGCAGGTACG GGAGAGCGTG CGGGCCAAGC TTAGGATTCT GGTGCGGCGG
ACGTTGCAGC GGTACAAGTA CCCGCCAGAC AAGGCGCCAG CGGCGATTGA GTTGATTATG
GAGCAGGCGG AAGCCTTATC TAACCACTGG ACAAGGTGA
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| Protein sequence | MTEDQLEQQC LQWFAEGGWE IAHGPDLASD GEAPERADYR QVLLLADLEA AIQRINPHLP
QSAVEQAVAV VRKPESLDVV ISNRAFHRLL LDGVPVEYKR DDKVVHDQAF LVDFGDLTAN
RFRAINQFTI EGSKQLRRPD VICFINGLPL AVLELKSPGA ENVNIWDAYN QVQTYKDECS
DLFAYNEAAV ISDGYLARVG SLTASQERYM PWRTLRHEDD KPLLEWQLET MVRGFFDREL
FLDYIRYFVI FETDSDKLIK KIAGYHQFHA VCEAVKATVI AAQAPEHGHW AKEKRATYGD
EVLPGSKKAG VVWHTQGSGK SISMCCYAGK LLQQPEMNNP TLIVVTDRND LDGQLFATFS
AVRELLKQEP VQADDRDTLR RLLSERESGG IIFTTVQKFA LLNDESGHPI LNDRHNIVVI
SDEAHRSQYG LKATLKKDGT YKFGYARHMR DALPNASFIG FTGTPIESED KDTRAVFGDY
VSIYDIQDAV DDGATVPIFY ESRLAKLDIN REQIEELSDQ VEEVVEDDED VGSREKTKGE
WSRLEKLVGA GPRLKQVAED LVNHFETRSS TIDGKAMIVA MSREIAVHLY NEIVALRPEW
HDDDPEKGAI KIVMTGSASD RALLQPHIHN KQTKKRFEKR FKDINDPLRL VIVRDMWLTG
FDAPCCHTMY VDKPMKGHNL MQAIARVNRV FKDKPGGLVV DYIGIANELK QALKTYTDAK
GKGSPTHSAE EAYAILLEKL DIIHGMFAPG PKGKGFSYSG FDTEPRKVLL ATANYVLSLE
DGKKRFLDTV LAMNKAFSLC ATLDEAQTLQ KEVAFLSQVK TAITKFTSVD KKLTEEEKNT
ALRQILNNAL IAEGVTDVFA LCGLDKPNIG LLSDEFLEDV RQMPYKNFAV ELLEKLLKDD
IKAKTRNNVV QEKKYADRLQ ETLRKYNNRG IETAQVIEEL IAMAKQFQAE MERDAALGLN
PDEVAFYDAL ASNESAVREL GDEILKKIAV EITDKLRKST TVDWQVRESV RAKLRILVRR
TLQRYKYPPD KAPAAIELIM EQAEALSNHW TR
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