Gene Maqu_3370 details

Gene Information

• Locus tag: Maqu_3370
• Symbol: smpB
• ID: 4654253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 3728407
• End bp: 3728889
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639813349
• Product: SsrA-binding protein
• Protein accession: YP_960628
• Protein GI: 120556277
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0666937
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGA AGAAAGCAAA CGCCCCAACC AGCAACACCA TCGCCCTGAA CAAGAAGGCG 
AAGCACGAGT ACCATATTGA GGAGCGCTTC GAGGCTGGCC TGGCCCTGCT TGGCTGGGAA 
GTGAAGTCGT TGCGTGCCGG TAAGGCACAA CTGGTTGATG CCTATGTACT GCTGAAGGAT 
GGCGAAGCCT GGCTGCTGGG CTCCCACATC ACGCCTCTGA ATACGGCCTC TACCCATGTG 
ATTGCAGACC CGACCCGCAC TCGCAAACTG CTACTGCACG CCAAGGAAAT CGCAAAGATT 
GTCGGCCAGG TGAATCAGGC GGGTTACACC TGCATTCCCC TCGCCCTTTA CTGGAAAAAG 
AACAAGGTGA AATGCGAGAT CGCCCTGGTG AAAGGCAAGA AGCTGTTCGA CAAACGCGCT 
ACCGAGAAAG AGCGTGACTG GAACCGCCAG AAACAGCGCA TCATGCGCGA GGCCAACACC 
TGA 

 

Protein sequence

MSKKKANAPT SNTIALNKKA KHEYHIEERF EAGLALLGWE VKSLRAGKAQ LVDAYVLLKD 
GEAWLLGSHI TPLNTASTHV IADPTRTRKL LLHAKEIAKI VGQVNQAGYT CIPLALYWKK 
NKVKCEIALV KGKKLFDKRA TEKERDWNRQ KQRIMREANT