| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3363 |
|---|
| Symbol | |
|---|
| ID | 4653937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 3722117 |
|---|
| End bp | 3722854 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639813342 |
|---|
| Product | GrpE protein |
|---|
| Protein accession | YP_960621 |
|---|
| Protein GI | 120556270 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00347236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTTG AAACCCGGGA AGCGGGCCCC ATATCGGTTC GCAAAGCGAT TCTTTCCTGC
TTTCTGCACA AGCGGGAGTG GTTATTTCTG CAGGCCTTCG TGGCCGTGAA AACGTTATCA
GGAGTTGTCA TGAGTGCTGA CGAAAAGCGC AACGAACAGG TAGAAGAACG CAACGAGGCA
GCAGAAGCTG CGGCGAAAGA GCAGGCTGCA GGTAACCAGG ATGCCGAGCA GTCACGGGAG
CAGGGCTCCG AGCTGGATGT GCTGCAACAG AAACTGCAGG AGTACCAGGA GCAGGCCTTG
CGGGCACAGG CGGAGATGCA GAATGTCCGT CGCCGGGCCG AGATTGATGT GGAAAAAGCT
CACAAGTTTG CGCTCGAGAA GTTTGTGAAA GAGCTGTTGC CGGTGGCTGA CAGTCTGGAG
AAGGCGGTCG AAAGCACCGA GGGTCACGAA AACGCAGGCG AGCTGGTTGC GTCCATTCGC
GAAGGTGTGG AAATGACCCT GACGCTGTTC ATGAACAGCC TGAAGAAATT CAACGTTGAA
CAGCTCAACC CGGTGGGTGA GCCGTTCGAT CCGCAGCAGC ACGAAGCCAT GTCCATGGTG
CCGGCGCCGG ATGCCGAGCC TAACAGCGTG GTTGCGGTTG TGCAGAAAGG TTATCTGCTT
AATGGCCGGG TGGTTCGTCC GGCCATGGTC GTAGTGGCCA AGGCAGAAGA TGCGCCAAAA
ATCGACGAGC AGGCTTGA
|
|---|
| Protein sequence | MTVETREAGP ISVRKAILSC FLHKREWLFL QAFVAVKTLS GVVMSADEKR NEQVEERNEA
AEAAAKEQAA GNQDAEQSRE QGSELDVLQQ KLQEYQEQAL RAQAEMQNVR RRAEIDVEKA
HKFALEKFVK ELLPVADSLE KAVESTEGHE NAGELVASIR EGVEMTLTLF MNSLKKFNVE
QLNPVGEPFD PQQHEAMSMV PAPDAEPNSV VAVVQKGYLL NGRVVRPAMV VVAKAEDAPK
IDEQA
|
|---|
| |