| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2934 |
|---|
| Symbol | |
|---|
| ID | 4655585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 3273918 |
|---|
| End bp | 3274850 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639812914 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_960195 |
|---|
| Protein GI | 120555844 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0219137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATA ATCCAACGAC AACAAACCCG TCACCCCTGC AAGACAGACG GGGGCAGCTG
GACATTGCCG ACAGCCTTCG CACAGCGGGC GTTGCGCCGC AGAGAATGAT GGACCTGGAG
CATGGAAAAA CCCTCGCCCA GTGGCAGAAC CGTCAGGGGG AGGTTCGCTA CGAGCGCCCT
CGCCATCACG CCCTGAGCAT CTACATTGAC AAGGGCCAGC AAGCCCAGCG GATGGTCAAC
GGAAAGGCGG TAAGCCGCGG CTTTCCCGGC GCCGTGTGCC TGTTTCCTGC GGGCAGCCGC
TCCATCTGGC AAATCGGCGG ACAATTCGAG TTTTTCCATT TCTATTTCAA TGATGTCGAT
GTCGCGCGAT GTGCCAGTCA AACCTGGGAT TCCGACCCGG ATAAGATTCA ACTGAACGAG
TGCTACCACC GTGAGGATCC GATCCTGGCC CAGGCAGGCA AACTCCTGGT GCTGAGCGAC
TGGCAGGGAC CCGGCCAGGC AATGGCGATG GATCACCTGG CACAGTGGCT CCTGCTACAG
GTGGTCAGCC AACACGCCAG CGTCGCCAAA GCACCTCCCG CAGTTACCGG GCAACTGTCC
CATCAGTACC GGCGACTGTT ACAGGAGCAG ATTCATGCGG AACTGGACCA GCCTCTCACA
CTGTCGGAAA TGGCCGGCTG GGTGAACCTC AGCCCCTACC ATTTCGCAAG ACTGTTCCGG
GCCACGTTTG GCTGCGCCCC CTACCAATAT GTACAGGAAC AACGGCTCAT CCGGGCACGC
GATCATCTGC GACAATCAAC CACAAAAATC ACCGCCATCG CTCTCGCCTG CGGCTTCAAC
GACGCCAGCC AATTCAGCCG GGCATTCAAA GCCCGGTTTG GTATGACACC ATCCCAGTGC
CGGAGCGAGG CCCACTCATC AAAGAGCCGG TGA
|
|---|
| Protein sequence | MIDNPTTTNP SPLQDRRGQL DIADSLRTAG VAPQRMMDLE HGKTLAQWQN RQGEVRYERP
RHHALSIYID KGQQAQRMVN GKAVSRGFPG AVCLFPAGSR SIWQIGGQFE FFHFYFNDVD
VARCASQTWD SDPDKIQLNE CYHREDPILA QAGKLLVLSD WQGPGQAMAM DHLAQWLLLQ
VVSQHASVAK APPAVTGQLS HQYRRLLQEQ IHAELDQPLT LSEMAGWVNL SPYHFARLFR
ATFGCAPYQY VQEQRLIRAR DHLRQSTTKI TAIALACGFN DASQFSRAFK ARFGMTPSQC
RSEAHSSKSR
|
|---|
| |