| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2792 |
|---|
| Symbol | |
|---|
| ID | 4656364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 3123719 |
|---|
| End bp | 3125002 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639812773 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_960054 |
|---|
| Protein GI | 120555703 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACA ATCTTCCCGA TTCGCTACCC GCGCCGGAAG TAGACCTGCT TTCCCCCATG
CTTAATCAGC AGGGTCAGGT GTGGACAGCG GATTTTCGCG GGCTCAAACT GCGCACCGCC
CTTCAGCCGA TTTACAGCAT TTCCCACAAA CGTACCGTCG GTTATGAAGC CCTGATCCGG
GCCTTCGATA ACGACAATTC AGCTGTTCTG CCTTTGCACC TGTTCGAGCT GCCCGCATCC
GAAGCCGAAA ATCTGTTGCT GGACAGACTC TGCCGGTACC TGCACATTCG CAACTACAGC
GAGATCAAGG ATCAGGTCAA CTGGCTGTTC CTGAACGTCT CCCCGAGGGT GGTCACCTCT
GGCTCTCAAT CCGATTCCTT TTTTGGACAA TTGCTTGAGA AAACCGGGCT GCCGCCACAT
CGAATCGTAA TGGAAATCGT TGAACAGCCA ACCGACGATG CTGAACGGCT ACGGGATACC
GTTGCCTACT ACCGCAAACT GGGGTGTCTG ACCGCCATTG ACGATTTTGG TGCCGGGCAC
TCCAATTTCG AGCGCATCTG GAATCTGTCA CCGGACATCG TCAAGCTGGA CCGTACCCTG
CTGACCCGGG CAACCGAAGA TCGCCGCGCC AGGCAGATAC TGAACGGCAT GGTATCCCTG
CTGCATCAAT CTGGCTGCCT GGTGTTGCTG GAAGGAGTGG AAACCCGGGA TCAGGCCATG
ATTGCCATTG ATGCCGGTGT CGACTTTGTA CAGGGCTTCT ACTTTCGCCG ACCCTGCCTG
GAACTGGACG AACTGCCCCA AAGCACAATG AATTTCGAGG ATTTGCTCGA AGAGTACAAA
AGCAGCAAGC AGATTAGCCA CGACCCGACC CAACTGGTCG TCAACCATTT CAGCGGGCCT
TTCCGGCGGG TGATCGAACG CCTGCAGAAG GGTCTGTCCA TGGATCAGGC CTGCTTTGAG
CTGCTCAGCC ACCACACGGT TTCCCGCTGC TATCTGGTGG ACGATCAGGG CGTTCAGCTG
GAAGACACTC TGGTTTCCGA GTCCGCCGTT AAAAAGCAGG ACCCAAGATT CCGACCACTG
GAAAACACCA GCAGTGCAGA CTGGTTTCGC CAGCAGTATC TCCGCCAGGC GCTGGCCCAG
CCAGAGAACA TTCATGTGAC CACTCCCTAT CTGTGCGTCA CTGGCGCCTA CATGTGCGTG
ACCCTGTCAC TGGCCTTCCG TCAGGACGGC AAACTCCGGG TACTCTGCTG CGATATTCTT
GCCAACGCGG ATCACAACCC GTAA
|
|---|
| Protein sequence | MSHNLPDSLP APEVDLLSPM LNQQGQVWTA DFRGLKLRTA LQPIYSISHK RTVGYEALIR
AFDNDNSAVL PLHLFELPAS EAENLLLDRL CRYLHIRNYS EIKDQVNWLF LNVSPRVVTS
GSQSDSFFGQ LLEKTGLPPH RIVMEIVEQP TDDAERLRDT VAYYRKLGCL TAIDDFGAGH
SNFERIWNLS PDIVKLDRTL LTRATEDRRA RQILNGMVSL LHQSGCLVLL EGVETRDQAM
IAIDAGVDFV QGFYFRRPCL ELDELPQSTM NFEDLLEEYK SSKQISHDPT QLVVNHFSGP
FRRVIERLQK GLSMDQACFE LLSHHTVSRC YLVDDQGVQL EDTLVSESAV KKQDPRFRPL
ENTSSADWFR QQYLRQALAQ PENIHVTTPY LCVTGAYMCV TLSLAFRQDG KLRVLCCDIL
ANADHNP
|
|---|
| |