| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2621 |
|---|
| Symbol | |
|---|
| ID | 4655190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2948682 |
|---|
| End bp | 2950448 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639812602 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_959883 |
|---|
| Protein GI | 120555532 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0998803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGGC AGGCGGTTTT CACACTGATG ACGCTGGTTG GGGTGCTGGG CACGCTGGCA
CTCACGCGTG TTTCTGCAGA CCTGGTGCTG ATGTCTGCGC TGGCTGTGCT GCTGGTGTTT
GGCGTTTTGG CACCCATCGA GGCACTGGCC GGTTTTGCAA ACCCGGGGGT TATTACCATC
GCAACCCTGT ATGTGGTGGC TGCCGGGTTG AAAGAGACCG GGGCGGTGCA GTGGATTGCC
CGCCTGTTGC TGGGCCACCC CAAAACCCAG CGTGGTGCGC AACTTCGAAT GATTGCGCCA
ACCGGCGTGT TGAGTGGCTT TATGAACAAT ACGGCCGTGG TGGCCATGTT TATTCCCGCC
ATTCAGGACT GGGCCCAGCG CCTGGGGATT CCCGCCTCTA AGCTGCTGCT TCCATTAAGT
TATGCTGCCA TTCTGGGTGG CACTTGTACG CTGATTGGCA CCAGTACCAA TCTGGTGGTG
GATGGCATGC TCCAGAGCTG GCTGGGTATT AACCTTGGTT TGTTTGAGTT GGCCTGGGTG
GGCGTTCCGC TTTTGGTGGT GGGCGGTGCG TTTCTGGTGC TGGTTGGTCA CCGACTGTTG
CCAGACCGAG GTGGGCTAAG CGAAGAGCTG GATCAGGTAC GAGAATACGG TGTAGAGGTA
GAGGTGGAGA GCCCAGGCCC CCTGGTGGGA AAAACCATCG CTCAGGCAGG GCTGCGAGCA
CTGACCTACG GTTACCTTAC GGAAATTGAT CGGGATGGCC GGCTGATTAC GGCGGTGGAG
CCGGACCGGA CGCTGCTGGC CGGCGATAAG CTCTATTTTG TTGGAGCGCC GGAGTGTGCC
AGTGAGCTTC GGCGCATCCA GGGCTTGAAG CCAGCACACG GTAGCGTTCA CAAGCTGGAA
ATGGAAAATC ATCAGCGCTG TCTGGTGGAA GTGGTTTTGG GGCCGGAGTT TCCTGCGCTG
AACAAGACCA TTCGGGATAG CCGTTTCCGG ACGCGCTTCA ATGCCGTGAT TCTATCTGTA
TCCCGGGAGG GGAAGCGGGT GCCTGGCAAG CTAGGGGACA TTACTTTCCG GATGGGTGAC
ACCCTATTGC TTGAGGCCAG CCACCAGTTT GTTGAGCAGT ACCGGTTCCG CCGGGACTTT
CTTCTGGTGA GCGCTCTGAA CGATTCGACA CCACCGGATT TTCGCAAGGC GCCCAGGGCG
CTCGGTATCC TCGCCGTGAT GGTGCTGTTG AGCGCGTCGG GACTGTTGTC GATTCTGGAG
GCGGCTTTTA TCGCGGCCGG CGCGATGATT GTAAGTGGTT GTCTTACGGC CAGCCGTGCC
AGGCGCAGCG TAGATTTGCC GGTGTTGGTG GTAATTGCGG CGTCCTTCGC CTTGGGCAAC
GCCATGACCG AGACGGGTGC TGCCCAATGG GTGGCGGGTT TGTTGCTCGG GTGGGGGCCG
CTGACGCCCT GGTTGGCACT GGCTATGGTT TATGTGCTGA CGGCGTTGTT CACGGAAGTG
ATCACCAATA ACGCTGCCGC AGTGTTAATG TTTCCCATTG CAATGGCAGT AGCCGAACAG
CTTGGCGTGG ATTTCTTACC CTTTGCAGTT GCCGTTATGT TTGCTGCGTC TGCCTCGTTC
ATTACACCTC TTGGTTACCA AACCAACTTG ATGGTTTATG GTCCCGGTCG CTATCGGTTT
ACAGATTATG TGCGGATTGG TCTACCATTG AGCTTTTTGG TGGCTTGTGT GGCAATAGGT
TTGATCCCAG CGGTTTGGGG ATTCTGA
|
|---|
| Protein sequence | MEWQAVFTLM TLVGVLGTLA LTRVSADLVL MSALAVLLVF GVLAPIEALA GFANPGVITI
ATLYVVAAGL KETGAVQWIA RLLLGHPKTQ RGAQLRMIAP TGVLSGFMNN TAVVAMFIPA
IQDWAQRLGI PASKLLLPLS YAAILGGTCT LIGTSTNLVV DGMLQSWLGI NLGLFELAWV
GVPLLVVGGA FLVLVGHRLL PDRGGLSEEL DQVREYGVEV EVESPGPLVG KTIAQAGLRA
LTYGYLTEID RDGRLITAVE PDRTLLAGDK LYFVGAPECA SELRRIQGLK PAHGSVHKLE
MENHQRCLVE VVLGPEFPAL NKTIRDSRFR TRFNAVILSV SREGKRVPGK LGDITFRMGD
TLLLEASHQF VEQYRFRRDF LLVSALNDST PPDFRKAPRA LGILAVMVLL SASGLLSILE
AAFIAAGAMI VSGCLTASRA RRSVDLPVLV VIAASFALGN AMTETGAAQW VAGLLLGWGP
LTPWLALAMV YVLTALFTEV ITNNAAAVLM FPIAMAVAEQ LGVDFLPFAV AVMFAASASF
ITPLGYQTNL MVYGPGRYRF TDYVRIGLPL SFLVACVAIG LIPAVWGF
|
|---|
| |