| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2620 |
|---|
| Symbol | |
|---|
| ID | 4655189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2947123 |
|---|
| End bp | 2948634 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639812601 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_959882 |
|---|
| Protein GI | 120555531 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.509429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAACC CCAAACACGA ACTCTTTGAT GCCAACCACT TGAGAACCGG CCTCAAAGAA
CGAGCGGTGA AAAGTGCAGG TATCACCATC GCCGCGCAGG GCATCAAATT GTTGCTCCAG
ATTGGTTCGG TTGCCATTCT GGCCCGGTTA CTGGAACCCT CTGACTTCGG CCTAGTCGCA
ATGGTTACAG TCTTTACCGG TCTTGCGTTG CAGTTTATGG AAGGCGGTCT TTCCATGGCC
ACTATCCAAC GAGACAAGAT AACGCATGCG CAGGTTTCCA ACCTGTTTTG GGTTAATGGT
GCTTTAGGGA TTGCCTTGTG TCTACTCGGC ATATTGATCT CGCCTTTGGT GTCCTTCATC
TACGATGAGC CCCGCCTTAC GTTAGTCATG GCAGCGATGA GTCTGATGTT CCTTATTGGC
GGGCTCTCAG TACAACACGA TGCGTTGTTA CGCCGGCAGA TGCGATTTAA AACGATGTCG
TTGATTGATG TCGTGTCGAT GGCGATGGGG ATAGCGGCTG GAATTGTGGC AGCGGTTGGT
GGCCTGCAGT ATTGGGCACT CGTAATCAGT CCTGTTACGA CCTTCTCTGC GAAAACAGTC
ATGCGATGGT TGAGTGTGCG CTGGGTACCA TCGATGGTAA GCCGGGGTTC CGGTGTGAGG
CCATTGTTGG GATTTGGAGC GAACCTGACG GGCGCTAATT TCATCGGCTA CCTAGCAACG
AACCTGACCC CCTTTGCGAT TGGCTATCTC GGGGGCGCCC AGATGTTAGG GTTATTTAAC
CGGGCCAATA TGCTCACGTC CATACCTTCC AGCCAGATGC TGCCGCCGGT GATGCATGTG
GTGCAGCCGA CGCTTGCGAG AGTCGCAAAC GATTCGGCCC GCCTGCGAAA TACAATAACG
TCTATCATGG GCAAGCTGGT GTTGGGAACC ATGTTTGTGA CGTTGACGAT GGCGGTTCTC
GCAGACTGGA TTGTTCAACT CTTCCTCGGT TCTGGCTGGG GTGATGCTGT TCCCATCTTC
AGAATGCTTG CGGTTTTTTC TCTGGTTGAG CCGATTGCCG GATTTCTGGC AGTTTCATTG
GTGGCCATTG GCAATGCGAG AGCGCTTCTG CGTTGGAAAT TAATTACGTT ATCCATTCTT
GTCGTTTCGA TTGGCATTGG CTCTCTCTGG GGAGCCTTTG GTGTTGTCGC GGCTTATGCG
CTGTCTGGTG TTTTTCTTCG CTTACCCGGG TTTCTCTACT ATGCGAGCCG GTTTCTGCCA
ATAACATTTG GTGAGTTTAT CAAGGCACTC GCTCCCTCTG CTCTTTGTGC GGTGGTTACT
GTGGGTGCGT TGTACAGCCT GAGACAGGTG CTGTTGGTGG AAAATCCAAT CGCAGGATTG
GCGTTGTTTT TTGCCTTTGC TGTTGTGATC TATACAACGT TGTGCGTGTT GCTAAGGCCA
ACGCGACGGG AACTGTTTGA AACACTGGGC CTGCTAAAAC TCATAACTTC CAGGAAATTG
GTTTCAAAGT GA
|
|---|
| Protein sequence | MPNPKHELFD ANHLRTGLKE RAVKSAGITI AAQGIKLLLQ IGSVAILARL LEPSDFGLVA
MVTVFTGLAL QFMEGGLSMA TIQRDKITHA QVSNLFWVNG ALGIALCLLG ILISPLVSFI
YDEPRLTLVM AAMSLMFLIG GLSVQHDALL RRQMRFKTMS LIDVVSMAMG IAAGIVAAVG
GLQYWALVIS PVTTFSAKTV MRWLSVRWVP SMVSRGSGVR PLLGFGANLT GANFIGYLAT
NLTPFAIGYL GGAQMLGLFN RANMLTSIPS SQMLPPVMHV VQPTLARVAN DSARLRNTIT
SIMGKLVLGT MFVTLTMAVL ADWIVQLFLG SGWGDAVPIF RMLAVFSLVE PIAGFLAVSL
VAIGNARALL RWKLITLSIL VVSIGIGSLW GAFGVVAAYA LSGVFLRLPG FLYYASRFLP
ITFGEFIKAL APSALCAVVT VGALYSLRQV LLVENPIAGL ALFFAFAVVI YTTLCVLLRP
TRRELFETLG LLKLITSRKL VSK
|
|---|
| |