| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2554 |
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| Symbol | |
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| ID | 4654920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 2857400 |
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| End bp | 2858530 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639812535 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_959816 |
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| Protein GI | 120555465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.115237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCT CCCCCACCCT GGAACTTGCC AAGGACCTTA TCCGCCGCCA ATCCGTAACG
CCGGACGACG CGGGCTGCCA GGAACTCATG ATGTCACGCC TGGCGCCGCT GGGTTTCAGT
GGGGAAAACC TGCGCTTTGG CGAAACCGAC AACCTGTGGG CAAGAAAGGG CAACAATGGG
CCGGTTCTGG CATTTGCCGG CCACACCGAC GTGGTACCCA CCGGCCCCGA GAAAAACTGG
GCGCACCCGC CGTTTGACCC GATCATCAAG GACGGCTACC TGCACGGTCG GGGCGCAGCG
GACATGAAGG GAAGCCTGGC GGCCTTCATC ACCGCCTGTG AACGATTTGT GGCCAACCAC
CCGAATCATC GGGGCTCGAT TGCCCTGCTG ATCACCAGCG ATGAGGAAGG CCCGGCCCAG
GATGGCACCG TAAAAGTGGT GGAAACCCTC GAAGCCCGCA ATGAGAAAAT GGACTGGTGC
CTGATTGGCG AACCGTCCAG CACCCACCAG GTAGGGGATG TCATCAAGAA TGGCCGGCGC
GGCTCCCTTC ACGGATACCT CACCGTTCGC GGCGTTCAGG GCCACGTGGC CTACCCGCAT
CTGGCCGAGA ATGCCGTCCA CAACGTTGCA CCGGCACTGG ACGCGTTGGC CAAGGAATTC
TGGGACAACG GCAACGACTT CTTCCCGCCT ACCACCTTCC AGATAACTCG TGTCGAGGCC
GGCGTCGGCA GCAATATTGT GCCCGGGGAG TGCCTGGTGC ACTTCAACTT CCGTTACTGC
ACCGAGAACA CCGCGGAAAG CCTGGAAGAG AGAGTGGTCG CTATCCTGGA TCGGCACAAC
CTGAAATACG ATCTGCAATG GCACCTCAGT GGCCGGCCAT TCCTGACCGA CAAAGGCGCG
CTGGTATCGG CCGCACAGAA TGCCATTCGA ACCGTGACTG GCCGTGAGAC AGAACTGTCT
ACGTCCGGCG GCACCTCAGA CGGTCGCTTC ATTGCGCCCA CCGGTGCCCA GGTGGTCGAA
CTTGGCCCGA TCAACGCCAC CATTCACAAG GTGGACGAGT GTGTGAAGGC TGAGGACCTG
GACACACTAT CCGAGATCTA CGAACAGATT CTGGTCGAGC TGCTGGCCTA A
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| Protein sequence | MSLSPTLELA KDLIRRQSVT PDDAGCQELM MSRLAPLGFS GENLRFGETD NLWARKGNNG
PVLAFAGHTD VVPTGPEKNW AHPPFDPIIK DGYLHGRGAA DMKGSLAAFI TACERFVANH
PNHRGSIALL ITSDEEGPAQ DGTVKVVETL EARNEKMDWC LIGEPSSTHQ VGDVIKNGRR
GSLHGYLTVR GVQGHVAYPH LAENAVHNVA PALDALAKEF WDNGNDFFPP TTFQITRVEA
GVGSNIVPGE CLVHFNFRYC TENTAESLEE RVVAILDRHN LKYDLQWHLS GRPFLTDKGA
LVSAAQNAIR TVTGRETELS TSGGTSDGRF IAPTGAQVVE LGPINATIHK VDECVKAEDL
DTLSEIYEQI LVELLA
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