Gene Maqu_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2478 
Symbol 
ID4655947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp2770176 
End bp2771378 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content55% 
IMG OID639812457 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_959740 
Protein GI120555389 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00049074 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA ACACCAAGAC CATCGTCAGA TTGGGTACAC CTCTTAAAAG CAACTCGTTC 
CGGGTACTTT TTTGTGGTTC CGGGGAATTG GGCAAGGAAG TTGTGATTGA GCTCCAGCGC
TTCGGCGTTG AGGTGATCGC CATTGATCGA TATGCCGATG CACCGGCAAT GCAGGTGGCC
CATCGTTCCC ATGTTGTCGA CATGCTTGAC CCTGTGGCTT TGCGGAGCGT CATCGAGAAA
GAGCGCCCGA ACCTGATTGT TCCGGAGATA GAAGCTATTG CCACCCCGGA GTTGGTCAAG
CTCGAGCAGG AAGGTTATCG GGTGATACCC AGTGCGCGGG CGGTGAACCT GACGATGAAT
CGTGAGGGTA TTCGTCGGTT GGCTGCGGAA GAGCTCGGGT TGCCAACGTC ACCGTATCGG
TTTGCGGGTA CGCGGGAAGA GTATTTGCAG GCGGTTGCGG AAGTCGGGCT TCCCTTGGTG
GTAAAACCAG TGATGAGTTC GTCTGGCAAG GGGCAAAGTA CAGTAAAGAC GGAAGCCGAT
ATTGAAAGAG CCTGGGAGTA CGCACAAACC GGAGGCCGAG CAGGAAAGGG CAGGGTAATC
GTCGAAGGCT TTGTCGATTT TGACTATGAG ATTACTTTGC TGACGGTGAG GCATAAAGAG
GGGATAACCT TCTGCGAGCC CATTGGTCAC AGGCAGGAAG ATGGTGACTA TCGCGAATCC
TGGCAGCCGC AGCCGATGAA TGACCTGGCA TTACAGCGTT CAAAAGAGAT CGCCCGTGCT
GTGGTGGAAG ATCTCGGCGG TTACGGCATC TATGGCGTTG AGCTGTTTGT GAAGGGTGAA
AACGTCTGGT TCTCGGAGGT CTCACCTCGC CCTCATGACA CGGGACTAGT CACGCTTGTA
TCCCAGGACC TGTCCGAGTT TGCTATCCAC GCCAGGGCCA TACTGGGTAT TCCCGTTCCT
GTTGTTCGAC AGAATGGTCC CAGTGCGTCG GCGGTCATTC TGCCGGAGGG AAGCTCCACA
GAAGTTTCCT ATACCGGCCT GGAAGAAGCC CTGGCACAAC CGGGAACCCA GCTACGCCTG
TTCGGAAAAC CGGAATTACA AGGCAGGAGG CGAATGGGGG TAGCGCTGGC GTTGGGTAGT
TCCATAGAGG ATGCCCGGGA GAAAGCCCGC ACTGCAGCAA GCTCTATAAA GGTCCAATTC
TGA
 
Protein sequence
MTDNTKTIVR LGTPLKSNSF RVLFCGSGEL GKEVVIELQR FGVEVIAIDR YADAPAMQVA 
HRSHVVDMLD PVALRSVIEK ERPNLIVPEI EAIATPELVK LEQEGYRVIP SARAVNLTMN
REGIRRLAAE ELGLPTSPYR FAGTREEYLQ AVAEVGLPLV VKPVMSSSGK GQSTVKTEAD
IERAWEYAQT GGRAGKGRVI VEGFVDFDYE ITLLTVRHKE GITFCEPIGH RQEDGDYRES
WQPQPMNDLA LQRSKEIARA VVEDLGGYGI YGVELFVKGE NVWFSEVSPR PHDTGLVTLV
SQDLSEFAIH ARAILGIPVP VVRQNGPSAS AVILPEGSST EVSYTGLEEA LAQPGTQLRL
FGKPELQGRR RMGVALALGS SIEDAREKAR TAASSIKVQF