| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2450 |
|---|
| Symbol | |
|---|
| ID | 4656929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2735453 |
|---|
| End bp | 2736430 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639812424 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_959712 |
|---|
| Protein GI | 120555361 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0817571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGATC TGACCCACAA CGACATTCAG CCGTATCAGG CTCACCCCGA ACTGGTTCGG
GCGCTGGGGC GCGTGGCTGT GTTCATGGGG GGCGATTCCG CCGAGCGGGA AGTATCCCTG
AAAAGTGGCA AAGCCGTGCT GGCCGCGCTG CAGTCGGCGG GTATCGATGC GGTTGGCCGG
GACATTCAGG GCTGCCTGCT GCGTACCGTG GACGAACCCG ACTTCGATCG TGTGTTTATT
GCCCTCCATG GCCGCGGCGG TGAGGACGGC ACCCTGCAGG CGATCCTTGG GCAGGCTGGC
ATTCCCTATA CCGGCAGTGA GGTGCTGGCA TCGGCACTGG CCATGGACAA ATTGCGGACC
AAGTATGTGT TCGAGGGTTG CGGGCTGCCT ACGCCGGCAT TTCGCGCCAT GACGTCAGTG
GGCGAGGCTG AGGGCATTGT GGCCGCACTG GGGACGCCCC TGAGTGTGAA ACCGGCCCAC
GAAGGTTCGA GTATCGGTAT CCGCAAAGTG AACAGCGCGG CAGAGCTGGC TGAAGCCTAT
GAGGCGGCAG CCCGGCTGGA TGATCTGGTG CTGGTAGAGC AGTGGATCGA AGGGCCGGAG
TTTACCGTCA GCCTGCTACA GGACAAAGCG TTACCGGCGA TTGGCCTGAG CACCGATCAC
GCCTTTTACG ACTATGACGC CAAGTACCTG GCGGACGATA CCCGGTACCG TATTCCCTGT
GGTCTGGCGC CCGATGACGA ATTGAGATTG CAGCATCTGG CCCTGGATGC CTTCCGGGTG
CTGGGCTGTC GCACCTGGGG ACGGGTCGAC ATCATGCAGG ATCGGGCCGG TGAGTTCTGG
TTGCTTGAGG TTAACACGGT TCCCGGTATG ACGGACCACA GCCTGGTGCC GATGGCCGCA
AAGGCGGCCG GCATCAGTTT TGAAGAACTG GTGGTGCGAA TTCTCAGGGA CACGCTGGCG
GAGGGCATCG ATGCTTGA
|
|---|
| Protein sequence | MSDLTHNDIQ PYQAHPELVR ALGRVAVFMG GDSAEREVSL KSGKAVLAAL QSAGIDAVGR
DIQGCLLRTV DEPDFDRVFI ALHGRGGEDG TLQAILGQAG IPYTGSEVLA SALAMDKLRT
KYVFEGCGLP TPAFRAMTSV GEAEGIVAAL GTPLSVKPAH EGSSIGIRKV NSAAELAEAY
EAAARLDDLV LVEQWIEGPE FTVSLLQDKA LPAIGLSTDH AFYDYDAKYL ADDTRYRIPC
GLAPDDELRL QHLALDAFRV LGCRTWGRVD IMQDRAGEFW LLEVNTVPGM TDHSLVPMAA
KAAGISFEEL VVRILRDTLA EGIDA
|
|---|
| |