Gene Maqu_2438 details

Gene Information

• Locus tag: Maqu_2438
• ID: 4656714
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 2720929
• End bp: 2722860
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639812412
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_959700
• Protein GI: 120555349
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.688474
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGACA CATACATTTT CAGGGAAATC CCGTCGCAGC GACCCAATAC GCCGTTGCTC 
GACCGGATAG ACGTGCCATC CCAGCTGCGT GAACTGCCAG CTGAGGACTT GCCCCGGCTG 
GCCAGGGAAT TGCGAGCGTT CTTGCTGTGG TCAGTGGGCC AGACCGGTGG TCATTTCGGC 
GCTGGCCTTG GCGTGCTCGA ACTGACGGTG GCCCTGCACT ACGTTTTCAA TACCCCCGAA 
GACCGGCTGG TATGGGACGT CGGCCACCAG GCCTATCCCC ACAAGATTCT GACCGGTCGC 
AAGGAACAAA TGGGCAGCAT TCGCCGTAAA GGAGGCCTGG CCGGCTTCCC GAAACGGGCA 
GAGAGCGAGT ACGACACCTT CGGCGTAGGT CATTCGAGCA CATCCATCAG CGCGGCACTG 
GGCATGGCAA TCGCCGCCCG GATGCAGAAC ACCGGCCGCA AGAGCATTGC CGTTATCGGG 
GATGGTGCCA TGACCGCGGG TATGGCCTTT GAAGCCCTGA ATCATGCCGG ACACCTTCAT 
GCCGACATGC TGGTGGTGCT GAACGACAAC GACATGTCGA TTTCACGCAA CGTCGGCGGG 
CTTTCCAACT ATTTCGCCAA GCTGCTCTCC AGCCGTACCT ACAATCAGGT GCGCGACAGC 
AGCAAGAAGG TGCTCAAAGG CACTCCTCAC CTGATGGCCC TGGCAAAGAA AACCGAAGAG 
CATTTCAAGG GTATGATTGC GCCCGGCACG CTGTTTGAGG AGCTGGGGTT CAACTATATT 
GGCCCCATCG ACGGCCACGA CCTGCCCTTG CTGGTGGAAA CCCTGGAGAA CATCCGTGAG 
CTGGAAGGCC CGCAGTTCCT GCACGTGGTC ACAACCAAAG GCAAAGGTTT TGCCCCTGCC 
GAAGCGGACC CGATTGGCTA CCATGCCATC AACAAGATTG AACCGGTGCC CGCCAGCAAG 
CCGGAACCGG TGAAGCCGAA ACCGGCCAGC CCGAAATACG CCAACGTCTT CGGGCAGTGG 
CTGTGCGATG CCGCCGAGCA GGACAGCCGG GTAGCCGGAA TTACCCCCGC CATGTGTGAA 
GGCTCGGATC TGCTGGCATT TTCAGAGCGC TTCCCGGACC GCTATTTTGA TGTCGCCATT 
GCCGAGCAGC ACGCGGTCAC CCTGGCGGCT GGCCTGGCCT GCGATGGCGC CAAGCCGGTC 
GTGGCCATTT ACTCAACCTT CCTGCAGCGG GCCTATGACC AGCTGGTGCA TGATGTCGCC 
ATCCAGAATC TGGATGTCCT GTTTGCCATT GATCGTGCGG GTCTGGTCGG CGAAGACGGC 
CCCACCCATG CCGGCGCCTT CGACATCAGC TATCTGCGCT GCATTCCCAA CATGCTGGTG 
ATGACTCCGT CGGACGAAAA CGAGACCCGG CAGCTGCTTC ACACCGGCCT TGAATACTGC 
GGCCCGGCCG CCGTTCGCTA CCCCCGGGGT ACCGGGCCCG GTGCCGAAAT CCAGCAGCAA 
CTCACCCCGC TGCCCATCGG CAAGGGCCGG CGCGTGCGCG ACGGTAGCGG TATCGCCATT 
CTCAACTTCG GCACCCTGCT GGCGCCGGGG CTGGAGGCTG CGGAAGCCCT GGGCGCCACG 
GTCGCCGACA TGCGCTTCGT CAAGCCTCTG GATGAGGCTT TGGTACTGGA ACTGGCGGAA 
ACCCACGACT TGCTGGTCAC ACTGGAAGAA AACGTTGTTG CCGGTGGCGC CGGCAGCGCG 
GTGACGGAAT TCCTGAATGC CCGCCAGGTT TCCATGCCGG TGTTACAACT GGGGCTACCG 
GATGCGTTCG TTGAGCACGG TCAGCACAAG GAATTACTGC GGGACTGTGG GCTGGATGCA 
GACGGTATTC GTCGCAGCAT TGCCCGTCGA ATGGAGCAGC TCGGATACCC GACAGTGGTG 
GCTGCTAAAT AA 

 

Protein sequence

MQDTYIFREI PSQRPNTPLL DRIDVPSQLR ELPAEDLPRL ARELRAFLLW SVGQTGGHFG 
AGLGVLELTV ALHYVFNTPE DRLVWDVGHQ AYPHKILTGR KEQMGSIRRK GGLAGFPKRA 
ESEYDTFGVG HSSTSISAAL GMAIAARMQN TGRKSIAVIG DGAMTAGMAF EALNHAGHLH 
ADMLVVLNDN DMSISRNVGG LSNYFAKLLS SRTYNQVRDS SKKVLKGTPH LMALAKKTEE 
HFKGMIAPGT LFEELGFNYI GPIDGHDLPL LVETLENIRE LEGPQFLHVV TTKGKGFAPA 
EADPIGYHAI NKIEPVPASK PEPVKPKPAS PKYANVFGQW LCDAAEQDSR VAGITPAMCE 
GSDLLAFSER FPDRYFDVAI AEQHAVTLAA GLACDGAKPV VAIYSTFLQR AYDQLVHDVA 
IQNLDVLFAI DRAGLVGEDG PTHAGAFDIS YLRCIPNMLV MTPSDENETR QLLHTGLEYC 
GPAAVRYPRG TGPGAEIQQQ LTPLPIGKGR RVRDGSGIAI LNFGTLLAPG LEAAEALGAT 
VADMRFVKPL DEALVLELAE THDLLVTLEE NVVAGGAGSA VTEFLNARQV SMPVLQLGLP 
DAFVEHGQHK ELLRDCGLDA DGIRRSIARR MEQLGYPTVV AAK