| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2272 |
|---|
| Symbol | |
|---|
| ID | 4653859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2544439 |
|---|
| End bp | 2546172 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639812246 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_959537 |
|---|
| Protein GI | 120555186 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTA AAAAGATCCT GCGTCGCCCC CAGCCGTCCG ATGTGACGGG ATGGGGGCAA
AACCTGCCTC CCATCCTTCG CCGTCTGTAC GCCGCCCGCG GTGTGCAATC CGACGACCAG
CTCCAGTACA CCCTGAAACA CCTGGCTTCG CCGATGCAGC TTCGCGGTAT TGATCGCGCA
GTTGAACTGC TGGCCGAGGC CATAGTGCAG AAACAGCGGG TAATGGTGCT GGGGGACTTC
GATGCCGATG GGGCTACCAG TACTTCGGTG GCTATGCTGG GTTTGTCGAT GCTCGGTGTG
GCGGCGATTG ATTTCCGGGT GCCCAGCCGA TTCTCTGATG GCTACGGCCT GACACCCGGC
ATCATCCACC GGTTGCAGGA AGACGGGGAT TTGCCGGATC TTCTGGTGAC CGTCGACAAC
GGCATCTCCG CCATCGAAGG CGTGCGTGCT GCCCGGGAGT TGGGCATCAA AGTGGTTATC
ACCGACCATC ATCTGGCCGG AGAAGAGCTG CCAGATGCCG ATGCCATTGT GAACCCCAAT
CAACCCGGTT GTCCGTTCCT GAGCAAAAAT GCGGCGGGAG TGGGCGTGAT GTTCTACGTG
CTCACGGCGC TGCGTAAGCA CCTGCGAGAC AACAACCGGC TGCCGGACCC GGAGCCTAAC
CTGGGTAGCC TGCTGGACCT GGTGGCCGTG GGTACCGTGG CCGACGTGGT GCCGCTGGAC
CATAACAACC GCATCTTTGT GGAGCAGGGC ATCCGCCGCA TCCGCAAAGG CGAAGCCCGA
CCGGGCATCC TGGCCCTGCT GGAAGTAGCC GGCCGCGACT ACACCGAAAT CAGCGCCACC
GATCTGGGCT TTGTGGTTGG CCCGCGCCTG AACGCTGCCG GCAGGCTGGA CGACATGAGT
ATCGGCATCG CCTGCCTGCT CGCCGACAGT CGCGACGAAG CGCTGCGTCT GGCCCGGGAA
CTGGACAACT TCAACCGCGA ACGCCGCACC ATTGAAAAAG ACATGAAAGC CCAGGCCCAG
GACCTGTTGG CCTCCATGTC CCTCGATATT GACGGCCTGC CCTGGGGGCT GGCCCTGTTC
GACCAGGACT GGCACCAGGG CGTGATCGGC ATCCTGGCGG CCCGCATCCG CGAACAGACT
CATCGCCCCA CCATTGCTTT TGCGCCCGAC GACGACGGCG AACACCTGAA AGGCTCTGCC
CGATCCATCC CCGGCCTGCA CATCCGGGAT GCGCTGGCCG TGGTTGATGC GAAGAATCCG
GGCTTGATGA AAAAATACGG CGGCCACGCC ATGGCCGCCG GCATGACCAT CGCCCGGGAC
GACCTCGCAT GTTTCAGCAA CGCCTTCGAC CAGGCCGTGC GTGACACGTT GAAACCGGAA
GACCTGGAAG CCGCCATCAC CACTGACGGC CCACTGGCTC CGGAAGAGCT GAACCTGGAC
ACCGCCTACC TGCTCAAACG CGCCGGCCCC TGGGGCCAGC ACTTCCCCGA GCCGGTGTTT
GACGGTGAAT TCCGGGTAGT GAGCCAGCGG ATTGTCGGCG AGAACCATCT GAAGCTGGTG
CTGCAGCCGG TTGAGGGCGG CGGCATTATT GATGGCATCG CCTTCAACAC CGGGCCGGAA
GTGCCGGACT TTACCCGGAG TGGCGCGCGG GTGGTTTATA AGCCGGATGC CAATACGTTC
CGGGGGCGGA CCAATTTGCA GCTTCTGGTG GATTACCTGG AACCTTTGGG CTGA
|
|---|
| Protein sequence | MTPKKILRRP QPSDVTGWGQ NLPPILRRLY AARGVQSDDQ LQYTLKHLAS PMQLRGIDRA
VELLAEAIVQ KQRVMVLGDF DADGATSTSV AMLGLSMLGV AAIDFRVPSR FSDGYGLTPG
IIHRLQEDGD LPDLLVTVDN GISAIEGVRA ARELGIKVVI TDHHLAGEEL PDADAIVNPN
QPGCPFLSKN AAGVGVMFYV LTALRKHLRD NNRLPDPEPN LGSLLDLVAV GTVADVVPLD
HNNRIFVEQG IRRIRKGEAR PGILALLEVA GRDYTEISAT DLGFVVGPRL NAAGRLDDMS
IGIACLLADS RDEALRLARE LDNFNRERRT IEKDMKAQAQ DLLASMSLDI DGLPWGLALF
DQDWHQGVIG ILAARIREQT HRPTIAFAPD DDGEHLKGSA RSIPGLHIRD ALAVVDAKNP
GLMKKYGGHA MAAGMTIARD DLACFSNAFD QAVRDTLKPE DLEAAITTDG PLAPEELNLD
TAYLLKRAGP WGQHFPEPVF DGEFRVVSQR IVGENHLKLV LQPVEGGGII DGIAFNTGPE
VPDFTRSGAR VVYKPDANTF RGRTNLQLLV DYLEPLG
|
|---|
| |