Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2260 |
Symbol | |
ID | 4653847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 2533668 |
End bp | 2534117 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639812234 |
Product | positive regulator of sigma E, RseC/MucC |
Protein accession | YP_959525 |
Protein GI | 120555174 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.32117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACGG AAACCGGTAA AGTCGTGGCC CTGGTGGGTG ATCAGGTTTG GGTTCAGACG ATAAGAACCA GTGCCTGTCA GAGTTGCTCG GCCCGCTCGG GCTGCGGGCA GCGAGCCCTG GCTGCGGTAT CCGGCGGCCG GGCGAACCAG GTGCTGGTAG ATAATTCCGT GGGCGCCCGG GTGGGGGATG AAGTGGTCAT CGGGCTGGAT GAACAGTCGC TGCTGAATGC CTCGCTGATT ATTTACGGTT TGCCGTTGGT GCTGATGGTG CTTGCCAGTG TGATGGCTCA TAACTGGGCC GCGGGGTCAG ACCTGGGCGC CATAGCCGGA GCGGTGGCAG GCCTGGGCGT CGGGTTCTGG CTGGTGCAGC GTTGGCAGGC CGGGGCCGGT GATCGCTACC AGCCGCGGTT GTTGAGGATA AAGACAATTC CATCCTCGAC ATGTCCATGA
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Protein sequence | MITETGKVVA LVGDQVWVQT IRTSACQSCS ARSGCGQRAL AAVSGGRANQ VLVDNSVGAR VGDEVVIGLD EQSLLNASLI IYGLPLVLMV LASVMAHNWA AGSDLGAIAG AVAGLGVGFW LVQRWQAGAG DRYQPRLLRI KTIPSSTCP
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