Gene Maqu_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2163 
Symbol 
ID4655489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand+ 
Start bp2427743 
End bp2428279 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID639812138 
Product2'-5' RNA ligase 
Protein accessionYP_959429 
Protein GI120555078 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.705282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAC TGTTCTTCGG GCTGGAAATT CCTGAGTCGA TCAAGACCAG CCTCTTAAAG 
GTAAAAACTG ACATTAAAGG TGCCCGCTGG CAAAGCAAAA CCCAGCTTCA CCTAACCCTG 
GCGTTTCTGG GAGAGGTGGA GGCCGAACAG GTAATCCAGG CTCGGGATAA CGCCAGAAAG 
GTGACCCATA CGCCTTTTAA GCTGGAAGCC GCCGGGTTGG GTTGCTTCGG CAAGGAGGAG 
AGCCCGAAAA TCCTATGGGC GGGAGTCTCC CCCGAGGCAG AACTGAGGGG ACTGCAACGC 
ACCCTTGCCC AAAGGCTCAT CAACGACGGC TTCACTCTCC AGAATCCCTC ATTCAAACCT 
CACATCACAC TGAGCCGCTT TCGGGCTGGC GCAGGCTCGG TGGCCGGGCT GATCGAGCAC 
TACCAGAGGA CCCGGTTTGG CAGTTGGCCG GTTCAGGGCT TTGCACTGTT TGAAAGCAGT 
CCAGGCCAAA GCGGCTCGGT CTATACCGTA CTGGAACGCT ATCCGTTAAC CACCTGA
 
Protein sequence
MPRLFFGLEI PESIKTSLLK VKTDIKGARW QSKTQLHLTL AFLGEVEAEQ VIQARDNARK 
VTHTPFKLEA AGLGCFGKEE SPKILWAGVS PEAELRGLQR TLAQRLINDG FTLQNPSFKP 
HITLSRFRAG AGSVAGLIEH YQRTRFGSWP VQGFALFESS PGQSGSVYTV LERYPLTT