Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2075 |
Symbol | |
ID | 4653991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 2320630 |
End bp | 2321676 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639812051 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_959343 |
Protein GI | 120554992 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000856929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAT CCCGAACGCC GGCCCGGAAT GCTCTGGGCG ATATCAGCCT GCTCTACGTG TCCGTGCTAC TGCGGGCCGT TGCTGCCGAA GGTGGAGATG CGGAACAGCT GAAAGCACGG TTCCATCTGA GCGCTCCGGA ACAGGCGGCC GTCGATGCCC GTATCAGCAT CCCCAGATTC ATGCGGCTGG GCCACGCCGC GATCAATGCC ACAGGGAATC CGGCGCTGGG GCTGCGCATG GGGGCGCTGT CACGCCCGGT CGACGCCGGC ATGGCGGGGC TCGCCGCCGA AACCGCCGGG ACAGTCGCCG GGGCACTTGA ATTGCTGGTG CGATATTCAC TCCTCACCAG TCATAATTCC CGCGGGGCTC CCAGCTTTCA GCGCGCAATG AAAACCGTGA GCTTCTATTC CATTCGCCCC TATAACCAAT ACAACTATTT TGTCGTGGAT TCTGTGCTGG CCGCCTGGAC CCAACTGATT CGACACATGA CCGGCCGCTA CGATGTACTG GAGCGTGTCC GGATTGAGTA CCCATCCATT GGTCAGGACG ACCTGTTCGA GAGCTGGTTC CGATGCCCCG TGGAATTCGG GGCTCCGGCA AACGATATCC GGATCAAGGA CACAATCTGG GAGCTGGTAC CGGCGCAGGC GCAGAGAGGC ATGAATGAGA AACTGGTGAG CCTGTGCGAA CAGGAACTGC AGCGAATCCA GCGAGGGTGG AGAATTACCG ATCGCGCCCG CCATCACATG GCGCCATTAC TGGTGGGTGG CAAGGTGTCG GTGGACGTTC TGGCCGCAAA AATGGGCCTG ACGCCCTGGA CACTGCAACG ACAGCTGGCC GAAGAAGGCA GTGGATTCCG GCAATTACTG GACACTACCC GCCAACAACT GGCCTGGGAT TACTTGAAGG AAACCGACAG CTCGCTGGCA GAAATTGCCT GGCTACTCGG CTTTGCCAAC CCTCCGGCAT TTCACAAGGC ATACCAGCGA TGGCATGGCA TCAGCCCGGG CGAACATCGA AAGATCCTGA GGATCAAGAA AAACTGA
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Protein sequence | MIKSRTPARN ALGDISLLYV SVLLRAVAAE GGDAEQLKAR FHLSAPEQAA VDARISIPRF MRLGHAAINA TGNPALGLRM GALSRPVDAG MAGLAAETAG TVAGALELLV RYSLLTSHNS RGAPSFQRAM KTVSFYSIRP YNQYNYFVVD SVLAAWTQLI RHMTGRYDVL ERVRIEYPSI GQDDLFESWF RCPVEFGAPA NDIRIKDTIW ELVPAQAQRG MNEKLVSLCE QELQRIQRGW RITDRARHHM APLLVGGKVS VDVLAAKMGL TPWTLQRQLA EEGSGFRQLL DTTRQQLAWD YLKETDSSLA EIAWLLGFAN PPAFHKAYQR WHGISPGEHR KILRIKKN
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