Gene Maqu_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2045 
Symbol 
ID4657291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp2280921 
End bp2282585 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content57% 
IMG OID639812020 
Productcholine/carnitine/betaine transporter 
Protein accessionYP_959313 
Protein GI120554962 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID[TIGR00842] choline/carnitine/betaine transport 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0189191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTC ATTGCGTTAT CCATTCACTC AGCATATTCA GTGATCACAC CAGACCAGGA 
GGCGCCAACG TGGGCGAGGT AGTGAAAGAC GAATATCAGA CGGATTACGT CGCAGGCCAG
GATAATATCA ATCCGTTCGG CCTGGATCTT CATAACTGGG TTTTCCCGGT AGCGGCCATC
ATTGTGGTTC TGTTTGTTAT CGGAACATTG ATGTTTCCGG TAGCGGCGAA GGAGACTCTT
GATGGGGCCA AGTGGGACAT TATTGCCAGT TTTGACTGGT TCTTCCTGCT CAGCGCCAAC
ATTTTCGTGG TTGTCAGCCT TGCGCTGATC TTCATGCCGG TGGGCAAGAT CCGGCTGGGT
GGACAGGATG CAACGCCCGA ATTCTCAACC ATGTCATGGT TTGCCATGCT GTTCGCAGCC
GGGATGGGGA TCGGCCTGAT GTTCTGGGCC GTGGCCGAGC CGGTGGCCTA CTACACAGGC
TGGTACGAAA CCCCGTTCAA TGTGGCTGCC AACTCTCCCG AAGCGCGTGA TCTGGCGATG
GGGGCAACCC TTTATCACTG GGGGCTGCAC CCCTGGGCAA TCTACGCCAT TGTGGCTCTG
TCTCTGGCGT TCTTTGCGTT TAACAAGAAC ATGCCACTGA CCATCCGTTC CGCGTTTTTC
CCACTGCTGA AAGACAAGGT GTGGGGCTGG CCGGGGCACA TCATTGATGT CCTCGCGGTT
GTGGCCACTA TCTTTGGTCT GGCCACGTCA CTTGGCTTTG GTGCCCAGCA GGCTGCCTCC
GGCCTGGATT ACCTGTTTCA GGTAGGTTCT GGCACCAATG TGCAGATGGC TATCATTGTT
GGCGTTACGG CCTTGGCGCT CATTTCCGTG CTGCGAGGTC TGGACGGCGG CGTTAAGGTG
CTCAGTAACA TCAACATGGC GACTGCGGGG ATCGTGTTGT TCTTCGTGAT CTTCGCCGGT
CCGACCATGA CCATTCTGGA GACCATCTGG GTAACCTCTT CCACCTACGT GGCCAACGTT
GTGCCGCTGA GTAATCCGTT TGGTCGTGAA GACGAGGCGT GGTTCCAGGG CTGGACTGTA
TTCTACTGGG CCTGGTGGAT TTCCTGGTCA CCGTTCGTAG GTATGTTTAT CGCGCGGGTT
TCAAAAGGCC GGACAGTACG TGAGTTCGTC ACTGCGGTTC TGATTATCCC GACCTTGATC
ACCACCGTAT GGATGAGTGG TTTCGGTGGC ACGGCACTGG AACAGATCCA GCAAGGCGTT
GGTGTGCTCG CAGACAAGGG GCTGACCGAG GTTTCTCTGG CGACCTTCCA GATGTTTGAG
CAGCTGCCCT GGACCGGCAT TGTCTCGTTC GTCGGCATTA TCCTGGTGCT GGTGTTCTTC
GTAACCTCGT CGGATTCCGG CTCGCTGGTG ATCGACAGCA TCACCGCTGG CGGCAAAACC
GATGCCCCGA CGGCTCAGCG TGTATTCTGG GTGGTCATGG AAGGTGCCAT TGCGGCGGCG
TTGATCTTCG GCGGTGGCGA AGACGCTCTG GGCGCGATCC AGGCCGTGGC CATCAGTGCC
GGGTTGCCCT TCACGGCAAT ACTTCTGCTG ATGACCTGGG GCTTGTTGAA AGGCCTCACC
CATGAGAGGA AGTTGCTCCT GCAAAGGGGT GAGCTGACCT CCTGA
 
Protein sequence
MIVHCVIHSL SIFSDHTRPG GANVGEVVKD EYQTDYVAGQ DNINPFGLDL HNWVFPVAAI 
IVVLFVIGTL MFPVAAKETL DGAKWDIIAS FDWFFLLSAN IFVVVSLALI FMPVGKIRLG
GQDATPEFST MSWFAMLFAA GMGIGLMFWA VAEPVAYYTG WYETPFNVAA NSPEARDLAM
GATLYHWGLH PWAIYAIVAL SLAFFAFNKN MPLTIRSAFF PLLKDKVWGW PGHIIDVLAV
VATIFGLATS LGFGAQQAAS GLDYLFQVGS GTNVQMAIIV GVTALALISV LRGLDGGVKV
LSNINMATAG IVLFFVIFAG PTMTILETIW VTSSTYVANV VPLSNPFGRE DEAWFQGWTV
FYWAWWISWS PFVGMFIARV SKGRTVREFV TAVLIIPTLI TTVWMSGFGG TALEQIQQGV
GVLADKGLTE VSLATFQMFE QLPWTGIVSF VGIILVLVFF VTSSDSGSLV IDSITAGGKT
DAPTAQRVFW VVMEGAIAAA LIFGGGEDAL GAIQAVAISA GLPFTAILLL MTWGLLKGLT
HERKLLLQRG ELTS