Gene Maqu_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2027 
Symbol 
ID4657273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp2259364 
End bp2261313 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content57% 
IMG OID639812002 
Productgeneral secretion pathway protein D 
Protein accessionYP_959295 
Protein GI120554944 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID[TIGR02517] general secretion pathway protein D 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAACC ACAAGATCAA CCTCCTCCAG GCAATCATGT TCGCGCTTTT ACTGCCGCTG 
GCTTCGCTGG CGCAGGCGCA GGAAGAAACC TGGAGGCTGA ACCTCAAGGA TGCGGACATT
CGGGCCTTCG TCACCCAGGT GGCAGACATA ACCGGCTACA GCTTTGTGGT GGATCCCCGG
GTTAAAGGGA AAGTGACGGT ATTGTCCAGT GCCCCCATGA ACAAGGACGA AATCTACGAT
CTTTTCCTGG CAGTGCTGAA TGTGCACGGT TTTACTGCGA TCCCCGGAGA GGAAGTCGTC
AAAATTGTCC AGCAGGTCGA TGCCAAACAG TCTGCAGAGA ACCTGAACAG ATTTCCGCAA
ACGCCCTCCG AGCAACTGAT CACCCGTGTT ATCCAGATTG ATAATGCCAA CGCCCTGGAA
CTGGTTCCGA TTCTGCGGCC GCTGGTTGCC AAATACGGCC ATCTGGCGGG CGTGGCTGCG
GCAAACGCCC TGATTGTCAG TGATCATGCC TCTAATATCG CTCGCATTGA ACAGATCGTT
CGGGAACTGG ACAGCCCCTC AAAATACGAA GTGGAAGTGA TTCAGCTGCA GGAAGCCTGG
GTTGGTGACA TGGTGACACT GCTGCAGGAG CTGGCACCAG AAGAGCTTGG CCGCGCTGGC
GGTGAGAATG CCGCACGCAA ATACAGCGTG ACAGCCGACG AGCGCAGCAA TCGATTGATT
CTGCGCGGCG ACGAAACCTT TCGGGACAAG ATGCGCGGTT TGATTCTCCA ACTGGACCAA
CCGTCTGCCA GTGGCGGAAC CACCAAGGTG ATTCGTCTTC GTCATGCCGA TGCCAAGACC
CTGACCGAAA TACTCAAAGG TGTGATGGGT GAGGTAGTGA AAGAGGGTAG CGCTGGCGGC
AGTTCGGGTG GCTCTGCCGG GAATCCGGGC AGCAGCTTTT CAGTCTTTGC CGACGAAGGG
CTGAATGCTC TCGTCGTCCG GGGGGACCCC TCCCTGATGC AGGAAGCCGA GCAGATTGTG
GCACAGCTGG ATGTGCGACG TGCCCAGGTG ATGATTGAAG CGGCGATTGT GGAAATCAGT
GATGAGCTGG GCGATCAGCT CGGGGTGCAA TTGGCGGCTG GCGATGAGTC TGCAGGTTCA
TTTCCGGTGC TGGGTACAAA CCTGACCAGT GGCCAGGGTA TGGTTGGCCT GAACTCCGTG
ATTGGAGCTC TGGTGGGTGA CACTATTCCG CAGCTAGCCG GCGGGTTGAC CGTCGGTGCC
GGGCAGCGTG ATGAGGATGG TGTTACCTGG GGCTTACTGA TTCAGGCACT GTCCTCTTCT
TCCGCGGCGA ACCTGTTGTC TACGCCCAGC ATTATTACCC TCGACAATCA GGAATCTGAA
ATTATCGTTG GCCAGAACGT ACCGTTCCGT ACTGGCCAGT CTACCGTGAC CGGAGACGGG
ACCACCAACC CGTTTACCAC CATCGAGCGG CGCGATGTGG GGTTGTCGCT GAAAGTCACG
CCTACGATCA GTGCCGATGG CCTGGTGCGT CTGGTGGTTG AGCAAACGAC CGAGGACATT
TCCACAACCA GCGTTGATGG TGCATCCGAT CTGATCACCA ACAAACGTGA GATTAAAACC
ACCGTGCTGG CGGATGACGG TGAGACCGTG GTACTGGGCG GTCTGATCAA GGACGATTAC
CAGGTCAGCA AGAGCAAGGT GCCGCTGCTG GGCGACATCC CGGTGCTTGG TCGCTTGTTC
TCTTCTGAAT CCGAGACCCG CGTTAAGCGC AACCTGCTGG TTTTCCTACG CCCCACGATT
ATGCTGGGCA AGGCAGATGC TGTGGCGGCG ACCACTGAAA AGTTCAACCG CCTCTGGGAT
GTGAACCTGG AAGTGCGGGA AAAGCTTGGC TTGCCGCAGG AAGAATCTGA TCCGTCGGTT
GATATGCTGT TTGAAGGGCG CCGGCAGTAG
 
Protein sequence
MYNHKINLLQ AIMFALLLPL ASLAQAQEET WRLNLKDADI RAFVTQVADI TGYSFVVDPR 
VKGKVTVLSS APMNKDEIYD LFLAVLNVHG FTAIPGEEVV KIVQQVDAKQ SAENLNRFPQ
TPSEQLITRV IQIDNANALE LVPILRPLVA KYGHLAGVAA ANALIVSDHA SNIARIEQIV
RELDSPSKYE VEVIQLQEAW VGDMVTLLQE LAPEELGRAG GENAARKYSV TADERSNRLI
LRGDETFRDK MRGLILQLDQ PSASGGTTKV IRLRHADAKT LTEILKGVMG EVVKEGSAGG
SSGGSAGNPG SSFSVFADEG LNALVVRGDP SLMQEAEQIV AQLDVRRAQV MIEAAIVEIS
DELGDQLGVQ LAAGDESAGS FPVLGTNLTS GQGMVGLNSV IGALVGDTIP QLAGGLTVGA
GQRDEDGVTW GLLIQALSSS SAANLLSTPS IITLDNQESE IIVGQNVPFR TGQSTVTGDG
TTNPFTTIER RDVGLSLKVT PTISADGLVR LVVEQTTEDI STTSVDGASD LITNKREIKT
TVLADDGETV VLGGLIKDDY QVSKSKVPLL GDIPVLGRLF SSESETRVKR NLLVFLRPTI
MLGKADAVAA TTEKFNRLWD VNLEVREKLG LPQEESDPSV DMLFEGRRQ