Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2027 |
Symbol | |
ID | 4657273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 2259364 |
End bp | 2261313 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639812002 |
Product | general secretion pathway protein D |
Protein accession | YP_959295 |
Protein GI | 120554944 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAACC ACAAGATCAA CCTCCTCCAG GCAATCATGT TCGCGCTTTT ACTGCCGCTG GCTTCGCTGG CGCAGGCGCA GGAAGAAACC TGGAGGCTGA ACCTCAAGGA TGCGGACATT CGGGCCTTCG TCACCCAGGT GGCAGACATA ACCGGCTACA GCTTTGTGGT GGATCCCCGG GTTAAAGGGA AAGTGACGGT ATTGTCCAGT GCCCCCATGA ACAAGGACGA AATCTACGAT CTTTTCCTGG CAGTGCTGAA TGTGCACGGT TTTACTGCGA TCCCCGGAGA GGAAGTCGTC AAAATTGTCC AGCAGGTCGA TGCCAAACAG TCTGCAGAGA ACCTGAACAG ATTTCCGCAA ACGCCCTCCG AGCAACTGAT CACCCGTGTT ATCCAGATTG ATAATGCCAA CGCCCTGGAA CTGGTTCCGA TTCTGCGGCC GCTGGTTGCC AAATACGGCC ATCTGGCGGG CGTGGCTGCG GCAAACGCCC TGATTGTCAG TGATCATGCC TCTAATATCG CTCGCATTGA ACAGATCGTT CGGGAACTGG ACAGCCCCTC AAAATACGAA GTGGAAGTGA TTCAGCTGCA GGAAGCCTGG GTTGGTGACA TGGTGACACT GCTGCAGGAG CTGGCACCAG AAGAGCTTGG CCGCGCTGGC GGTGAGAATG CCGCACGCAA ATACAGCGTG ACAGCCGACG AGCGCAGCAA TCGATTGATT CTGCGCGGCG ACGAAACCTT TCGGGACAAG ATGCGCGGTT TGATTCTCCA ACTGGACCAA CCGTCTGCCA GTGGCGGAAC CACCAAGGTG ATTCGTCTTC GTCATGCCGA TGCCAAGACC CTGACCGAAA TACTCAAAGG TGTGATGGGT GAGGTAGTGA AAGAGGGTAG CGCTGGCGGC AGTTCGGGTG GCTCTGCCGG GAATCCGGGC AGCAGCTTTT CAGTCTTTGC CGACGAAGGG CTGAATGCTC TCGTCGTCCG GGGGGACCCC TCCCTGATGC AGGAAGCCGA GCAGATTGTG GCACAGCTGG ATGTGCGACG TGCCCAGGTG ATGATTGAAG CGGCGATTGT GGAAATCAGT GATGAGCTGG GCGATCAGCT CGGGGTGCAA TTGGCGGCTG GCGATGAGTC TGCAGGTTCA TTTCCGGTGC TGGGTACAAA CCTGACCAGT GGCCAGGGTA TGGTTGGCCT GAACTCCGTG ATTGGAGCTC TGGTGGGTGA CACTATTCCG CAGCTAGCCG GCGGGTTGAC CGTCGGTGCC GGGCAGCGTG ATGAGGATGG TGTTACCTGG GGCTTACTGA TTCAGGCACT GTCCTCTTCT TCCGCGGCGA ACCTGTTGTC TACGCCCAGC ATTATTACCC TCGACAATCA GGAATCTGAA ATTATCGTTG GCCAGAACGT ACCGTTCCGT ACTGGCCAGT CTACCGTGAC CGGAGACGGG ACCACCAACC CGTTTACCAC CATCGAGCGG CGCGATGTGG GGTTGTCGCT GAAAGTCACG CCTACGATCA GTGCCGATGG CCTGGTGCGT CTGGTGGTTG AGCAAACGAC CGAGGACATT TCCACAACCA GCGTTGATGG TGCATCCGAT CTGATCACCA ACAAACGTGA GATTAAAACC ACCGTGCTGG CGGATGACGG TGAGACCGTG GTACTGGGCG GTCTGATCAA GGACGATTAC CAGGTCAGCA AGAGCAAGGT GCCGCTGCTG GGCGACATCC CGGTGCTTGG TCGCTTGTTC TCTTCTGAAT CCGAGACCCG CGTTAAGCGC AACCTGCTGG TTTTCCTACG CCCCACGATT ATGCTGGGCA AGGCAGATGC TGTGGCGGCG ACCACTGAAA AGTTCAACCG CCTCTGGGAT GTGAACCTGG AAGTGCGGGA AAAGCTTGGC TTGCCGCAGG AAGAATCTGA TCCGTCGGTT GATATGCTGT TTGAAGGGCG CCGGCAGTAG
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Protein sequence | MYNHKINLLQ AIMFALLLPL ASLAQAQEET WRLNLKDADI RAFVTQVADI TGYSFVVDPR VKGKVTVLSS APMNKDEIYD LFLAVLNVHG FTAIPGEEVV KIVQQVDAKQ SAENLNRFPQ TPSEQLITRV IQIDNANALE LVPILRPLVA KYGHLAGVAA ANALIVSDHA SNIARIEQIV RELDSPSKYE VEVIQLQEAW VGDMVTLLQE LAPEELGRAG GENAARKYSV TADERSNRLI LRGDETFRDK MRGLILQLDQ PSASGGTTKV IRLRHADAKT LTEILKGVMG EVVKEGSAGG SSGGSAGNPG SSFSVFADEG LNALVVRGDP SLMQEAEQIV AQLDVRRAQV MIEAAIVEIS DELGDQLGVQ LAAGDESAGS FPVLGTNLTS GQGMVGLNSV IGALVGDTIP QLAGGLTVGA GQRDEDGVTW GLLIQALSSS SAANLLSTPS IITLDNQESE IIVGQNVPFR TGQSTVTGDG TTNPFTTIER RDVGLSLKVT PTISADGLVR LVVEQTTEDI STTSVDGASD LITNKREIKT TVLADDGETV VLGGLIKDDY QVSKSKVPLL GDIPVLGRLF SSESETRVKR NLLVFLRPTI MLGKADAVAA TTEKFNRLWD VNLEVREKLG LPQEESDPSV DMLFEGRRQ
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