| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1875 |
|---|
| Symbol | |
|---|
| ID | 4657030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2089124 |
|---|
| End bp | 2090077 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639811845 |
|---|
| Product | RluA family pseudouridine synthase |
|---|
| Protein accession | YP_959144 |
|---|
| Protein GI | 120554793 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.763374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACAG AGGTTCAGTG GATTACCGTT GATGAGGATA TGGCAGGGCA GCGGGTGGAT
AATTTCCTGC TTGCACGATT GCGGGGGGTG CCCAAAAGCA TTGTCTACCG CATTGTCAGA
AAGGGTGAGG TGCGGGTAAA CAAGGGGCGT GTAAAGCCCG ATTCCCGTCT TAATCCGGGG
GATGTGGTCA GAATTCCGCC GCTGGTGCAG CAGGCCAGGG CGGAGCAGCC CAAGCCCGGC
AGTCGGGTGC AGGGGGTTAT GGAGGCTGCG GTCGTTTTCG AAAACGATGA AATGCTGGTG
GTGAACAAGC CCTCCGGTAT AGCGGTTCAT GGCGGAAGCG GACTGAGTTT CGGTTTGATT
GAAGTGTTGC GGTCGGCCCG GACGGAAGCC AGGTTCCTGG AGTTGGTTCA TCGTCTGGAT
CGCGATACGT CTGGACTGGT AATGGTGGCT AAAAAGCGTT CTGCTTTGCG GTTTTTGCAG
GATGAGCTGC GGCAGAAGCG GATTCGCAAG TATTACCACG CTCTGGTGGT CGGCAGTTGG
CCGGAAAATG TTGATCGTGT TGCTGAGCCG CTGTTGCGTT TTGAGATGCC TAATGGCGAG
CGTCGGGTTC GGGTCAGTGA GGAGGGCAAA AGTTCCCTGA CTTTGTTTAC CTGTTTGCAG
CGATTTCAGG GGTATAGTCT TGTTGAGGCA TCGCCGGTGA CCGGCAGGAC TCACCAGATT
CGGGTACACA GTGCCTGGGC GGGTCATCCG ATTGCGGGCG ATGACAAGTA TATGGATGAT
GCGAGCCTGA AAGCTTTCCG GGCCATTGGT GGGCAGCGCT TGATGTTGCA CGCCAGGGCT
CTTGAGTTTT CGCTTCCGGG TTCGGGTGAG CCCATGCGGC TGGAAGCAGT ATACGACGGG
CCCTTTTCCG GGGTGCTCGA AGAATTGACC AAGCGAAGCG GGAAGCGGTC TTGA
|
|---|
| Protein sequence | MATEVQWITV DEDMAGQRVD NFLLARLRGV PKSIVYRIVR KGEVRVNKGR VKPDSRLNPG
DVVRIPPLVQ QARAEQPKPG SRVQGVMEAA VVFENDEMLV VNKPSGIAVH GGSGLSFGLI
EVLRSARTEA RFLELVHRLD RDTSGLVMVA KKRSALRFLQ DELRQKRIRK YYHALVVGSW
PENVDRVAEP LLRFEMPNGE RRVRVSEEGK SSLTLFTCLQ RFQGYSLVEA SPVTGRTHQI
RVHSAWAGHP IAGDDKYMDD ASLKAFRAIG GQRLMLHARA LEFSLPGSGE PMRLEAVYDG
PFSGVLEELT KRSGKRS
|
|---|
| |