Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1557 |
Symbol | trpA |
ID | 4656622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 1740772 |
End bp | 1741584 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639811522 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_958828 |
Protein GI | 120554477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGAA TTGAAGGCGT ATTGAAAGCA TTGAAAGAGC AGGGCCGCAA GGCGCTGATT CCCTATATTA CCGCTGGTGA CCCACATCCG GAGGAAACGG TCAGCCTGAT GCATACCCTG GTCTCTGCCG GTGCTGATAT TATCGAGCTG GGCGTGCCGT TCTCGGACCC GATGGCTGAT GGTCCGGTGA TTCAGCTGGC CTGTGAAAGG GCGCTCAAGC ACGGTACGTC GCTGCGTCAG GTGATGGCGA TGGTCAAGGA GTTCCGCAAG ACCGATCCGG ATACCCCGGT GGTGCTGATG GGTTATCTGA ACCCGATGGA GGCCATGGGC TATGAAGCGT TTGCAGATGC GGCAGCGGAC GCAGGTGTCG ATGGCGTTCT GACGGTTGAC CTGCCTCCCG AAGAGGCTGA TCAGGTAGCA CCGCTGTTTG CCGACCGCCA TCTGGATCCG GTTTTCCTTT TGGCGCCGAC AACCACGGAT GAACGGATCA AGGCGATCAG CGAGCACTCA TCCGGCTATG TGTACTATGT TTCTATCAAG GGCGTGACCG GGTCCGCAAC CATTGATGTT GATGAAGTCG CGAAGAAAGT GGCCCACGTG CACGAGCTCA CGGCGTTACC GGTGGGTGTG GGCTTTGGTA TCAGGGATGC GGAAACTGCC GCTGCAGTAG GCAGAGTATC CGATGGTGTA ATTGTTGGCA GTGTTCTGGT CGATACAATA GCCCGACATC AGACAGATCC TGACGCTTTG CGTAACGCAC TGACGGATCT GCTGCACCCG ATGCGCGAAG CGCTGGACAG CCTCGCTCAC TGA
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Protein sequence | MSRIEGVLKA LKEQGRKALI PYITAGDPHP EETVSLMHTL VSAGADIIEL GVPFSDPMAD GPVIQLACER ALKHGTSLRQ VMAMVKEFRK TDPDTPVVLM GYLNPMEAMG YEAFADAAAD AGVDGVLTVD LPPEEADQVA PLFADRHLDP VFLLAPTTTD ERIKAISEHS SGYVYYVSIK GVTGSATIDV DEVAKKVAHV HELTALPVGV GFGIRDAETA AAVGRVSDGV IVGSVLVDTI ARHQTDPDAL RNALTDLLHP MREALDSLAH
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