Gene Maqu_1340 details

Gene Information

• Locus tag: Maqu_1340
• ID: 4655922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 1516575
• End bp: 1518509
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639811307
• Product: ABC transporter related
• Protein accession: YP_958615
• Protein GI: 120554264
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCCGC GACCGTTGAT TGAGCTTCAA GACATTACCC GATCCTTTGG CGAGGGCGAA 
CTGGCGGTTC CTGTGCTCAA GGGCATTGAT CTGAAAATCT GGCCCGGTGA GTTTGTGGCC 
ATCATGGGGC CATCGGGCTC CGGCAAATCT ACCCTGATGA ACATCCTCGG CTGTCTGGAT 
CAGCCCAGCG CTGGCCAGTA CCGGTTCAAT GGCAGGGACG TGTCTGCCCT GGACCGGGAC 
GAACTGGCAC GGCTTCGGCG CGATGCCTTT GGTTTTGTGT TCCAGAGCTA TAACCTGTTG 
CCTGGAATGA CTGCCCGGGA GAATGTTGAG ATTCCGGCAA TTTATGCCGG TATGGCGCCG 
GCCGAGCGGC ATGCAAGGGC GGAACGGTTA CTCACCGGGC TCGGGCTGGG CGAGCGCCTG 
TCCCACAGGC CGGCCCAGTT ATCCGGTGGC CAGCAACAGC GAGTGTCAAT TGCCCGGGCC 
CTGATGAACG GCGGCCAGTT AATCTTCGCA GACGAACCGA CCGGTGCTTT GGACAGCAAA 
AGCAGCCAGG AAGTGATCCG GCTGTTAACC GATCTTTCCA GACAAGGCCA TACCATCATC 
TTGATTACCC ACGATCCCGA CGTGGCAAAA GTGGCCCGCC GTCAAATCCG CATTGCCGAT 
GGTGAGCTTG TTGAGGACAC CGGCGCCGAA ATGCCATCCG CGCAAATACC AGAAACTGAC 
CAGAATGGCC GTCGCCACTC TCGTCTTGGG GATTGGCAGG AGGCCCTGAA AAGCGCTGTG 
CGTTCCCTGC ACAGCAACCT GTTTCGGACG GCGTTGACAC TGCTTGGCAT CGTGATCGGG 
GTTGCCTCGG TGATCACCAT GCTGGCGATC GGGGAGGGGG CCCGAAAGGA TGTCGTCGAC 
CGAATCAGCA CCATGGGCAG TGATCTGCTG CTGGTGCGCC CGGGTGGTCC CGATCAGCGG 
GGTGGGCGCT GGAGCGTGAC CACACTGGTG CCATCTGACT TCAAAGCAAT CAATGAGATA 
GAGGGTGTTC TTGCAGCAAT ACCTGAGCTT ACTGGCGGCC AGACGCTGCG CTATTCCAAC 
CGGGATCACT CGGCTGAGAT CAATGCCACC TCCTTCCGGT TCCCGGTGGC CCGCCAGTGG 
CCTGTTGTTG AGGGCACCTT CTTCAGCGCC CAGGATGAAG CCAGTTACGC AGCCGTAGCA 
GTATTGGGCA AAACCACCGC CAACGCTCTG TTTCCTGACG AAAGCCCCCT TGGTAAACAC 
CTGATGGTTA ACAACGTGCT GTTTCAGGTG ATTGGCGTGA TGGATGAAAA AGGCGCCTCT 
CCCATGGGAC AGGACCAGGA CGATGTGGTG TTTGTTCCCT ACACCACGGG CAGCCTGCGC 
ATTTTCGGGC AAACGCACCT GCGCAACATC ACCGTGGCTG TGGCCGACAT CGACCGTATG 
GATGAGATCG AAGCCCTCAT TCACGACACT CTGATGGCCC GCCATGGCAT TGAGGACTTT 
ACTATCCGCA ACATGGCTTC ATTGATTGAA ACCATTTCGG AAACCCAGAA TACACTCACC 
TGGCTGCTGG GCTCTATTGC AGCAATTTCC CTCCTTGTGG GTGGCATCGG GGTGATGAAT 
ATCATGCTGG TGAGCGTCAC TGAACGTACC CGCGAAATCG GTATTCGCAT GGCCACCGGT 
GCCCGGGCGT GGAATATCCT GCAGCAGTTT CTGACCGAGG CCTGGCTGGT ATCGGCCATA 
GGCGGGTTGA TTGGTGTTGT CATCGGCATT GCCGCAACCC GGATTATTGG CTCTCTGGGC 
ACACCCATTC ACATGACGCT GCTACCCATG GCTCTGGCCT TTGGTTGCGC TTTTGCCACA 
GGCCTGCTGT TCGGGTTTCT GCCCGCCCGT AAGGCCGCCC ATCTGGACCC TGTTCATGCC 
CTGGCCTCGG AGTAA 

 

Protein sequence

MSPRPLIELQ DITRSFGEGE LAVPVLKGID LKIWPGEFVA IMGPSGSGKS TLMNILGCLD 
QPSAGQYRFN GRDVSALDRD ELARLRRDAF GFVFQSYNLL PGMTARENVE IPAIYAGMAP 
AERHARAERL LTGLGLGERL SHRPAQLSGG QQQRVSIARA LMNGGQLIFA DEPTGALDSK 
SSQEVIRLLT DLSRQGHTII LITHDPDVAK VARRQIRIAD GELVEDTGAE MPSAQIPETD 
QNGRRHSRLG DWQEALKSAV RSLHSNLFRT ALTLLGIVIG VASVITMLAI GEGARKDVVD 
RISTMGSDLL LVRPGGPDQR GGRWSVTTLV PSDFKAINEI EGVLAAIPEL TGGQTLRYSN 
RDHSAEINAT SFRFPVARQW PVVEGTFFSA QDEASYAAVA VLGKTTANAL FPDESPLGKH 
LMVNNVLFQV IGVMDEKGAS PMGQDQDDVV FVPYTTGSLR IFGQTHLRNI TVAVADIDRM 
DEIEALIHDT LMARHGIEDF TIRNMASLIE TISETQNTLT WLLGSIAAIS LLVGGIGVMN 
IMLVSVTERT REIGIRMATG ARAWNILQQF LTEAWLVSAI GGLIGVVIGI AATRIIGSLG 
TPIHMTLLPM ALAFGCAFAT GLLFGFLPAR KAAHLDPVHA LASE