Gene Maqu_1253 details

Gene Information

• Locus tag: Maqu_1253
• ID: 4655606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 1411549
• End bp: 1412259
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639811222
• Product: ABC transporter related
• Protein accession: YP_958530
• Protein GI: 120554179
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0397899
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGGCA AAGGGATACA CATCGAAAGT TTAAGCAAGC GGTATGGCGA TGGTGACACC 
GCTGTCTTTG CCTTGAGAGA CGTGAATATG CATGTTGCGC CTGGTGAAGT GGTGGGACTG 
ATCGGCCCTT CCGGGTCCGG CAAGAGCACG CTGCTCAAGT GTCTGGGTGC GGTGATCGAA 
CCGACCGCCG GTCGCATGAC GCTGGGCGAT GAAGTGATCT ACGCCGATGG CTGGAAAGTC 
CGCGACCTGC GCGCCTTACG GCGTGACAAG ATCGGTTTCG TTTTCCAGGC GCCGTACCTG 
ATTCCGTTTC TCGATGTCAC CGACAACGTG GCGCTGCTGC CGATGCTTGC AGGCGTCGCG 
AATGGAGAGT CGCGCGCGAA GGCACTGGAA TTGCTCACAG CGCTTGATGT GCAACACCGA 
GCTCGCGCAA TGCCCTCGCA ACTCTCCGGT GGCGAGCAGC AACGGGTCGC CATCGCGCGC 
GGACTGGTCA ATCGTCCGCC GGTGATCCTG GCCGATGAAC CCACTGCGCC GCTGGATTCC 
GAGCGCGCCA TGGCTGTAAT CCGCATCCTC AACGACATGG CCCGGAAGTT CGAGACCGCC 
ATCATCGTCG TCACCCATGA CGAAAAGATC ATCCCCACAT TCAAGCGCAT CTACCACATC 
CGCGACGGCG TGACCCATGA GGAAGCTGGC GAAGGGCGGG AGTTCGAATG A 

 

Protein sequence

MSGKGIHIES LSKRYGDGDT AVFALRDVNM HVAPGEVVGL IGPSGSGKST LLKCLGAVIE 
PTAGRMTLGD EVIYADGWKV RDLRALRRDK IGFVFQAPYL IPFLDVTDNV ALLPMLAGVA 
NGESRAKALE LLTALDVQHR ARAMPSQLSG GEQQRVAIAR GLVNRPPVIL ADEPTAPLDS 
ERAMAVIRIL NDMARKFETA IIVVTHDEKI IPTFKRIYHI RDGVTHEEAG EGREFE