Gene Maqu_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_1200 
Symbol 
ID4656887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand- 
Start bp1362512 
End bp1363516 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content56% 
IMG OID639811167 
ProductABC transporter periplasmic-binding protein 
Protein accessionYP_958478 
Protein GI120554127 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00816728 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAC GCTTGATTCC CGCGTTGTTC GCCGTGTCGC TGCCGCTGAT GGTTGCCGCC 
GATGAACCGA CCGTCCTGAA TGTGTATACC CATCCCTCCT TTGCCGCCGA ATGGGGCCCG 
GGGCCCGCAG TTAAAGAGGC GTTTGAAGCC CAATGCGGCT GCTCCCTGAA CTACACGGTA 
TTGGACAGCG GCGGAGACAT TCTGCAAAGG CTCCGGCTGG AAGGAAGCTC CACCCCGGCA 
GATGTGGTTC TGGGGCTGGA TACCGGCACC ATGGAGACCG CTCGGCAAAC CGGCCTTCTG 
GGCCGCCACG GCCAATCACT GGAACGCCTG GCTTTGCCTG TTAACTGGGA CGACGACACT 
TTCGTGCCCT ACGACTGGGG CTATTTTGCC TTTGTCTACG ATACAGAGCA GTTGTCGGAA 
CCGCCCTCAA GCCTTGAAGA ACTGGTCAAC GCGCCAGACG ATCTCAAGAT CATCATTCAG 
GATCCGCGCA CCAGCACACC GGGACTCGGC CTGTTGCTCT GGATGCATGC CGTCTATGGT 
GATGAAGCGC CAGCAAAGTG GCAGCAGCTC AGCGACAAGA TTCTCGCAAC CACCCAAAGC 
TGGAGTGACG GTTATTTCTC GCTATTCATG AATGGCGAAG CGCCTATGAT CCTCTCTTAC 
AGCACTTCTC CTGCGTATCA CATGGCTATC GACAAAACTG ACCGTTATCA GGCGGCCCGT 
TTCAATGAAG GACATTACCT GCAGGTGGAA GTCGCCGCCC TGGTGGAAAG CTCCGATAAC 
AAGACACTTG CCAGAGAGTT TCTGGACTTC ATGCTGACCG CGGACTTCCA GCGTCATCTT 
CCACTGAAGA ATGTGATGTA TCCGGCGGTT GATCTTGGCG ATGAATTGCC AGACGTTTTC 
GACAAGCTGA TTACACCATC CGAAGCCCTG TATATAGACC CCGCGAAAGT TGCCACCATT 
CGCCGACAGT TGGTGAACGA CTGGCTTGAT GCACTGACCG ACTGA
 
Protein sequence
MISRLIPALF AVSLPLMVAA DEPTVLNVYT HPSFAAEWGP GPAVKEAFEA QCGCSLNYTV 
LDSGGDILQR LRLEGSSTPA DVVLGLDTGT METARQTGLL GRHGQSLERL ALPVNWDDDT 
FVPYDWGYFA FVYDTEQLSE PPSSLEELVN APDDLKIIIQ DPRTSTPGLG LLLWMHAVYG 
DEAPAKWQQL SDKILATTQS WSDGYFSLFM NGEAPMILSY STSPAYHMAI DKTDRYQAAR 
FNEGHYLQVE VAALVESSDN KTLAREFLDF MLTADFQRHL PLKNVMYPAV DLGDELPDVF 
DKLITPSEAL YIDPAKVATI RRQLVNDWLD ALTD