| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1162 |
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| Symbol | |
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| ID | 4657171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 1323376 |
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| End bp | 1324362 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639811128 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_958440 |
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| Protein GI | 120554089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAA AAGGCCCCGA AAACAAAACA GCCCGTAGCG ATCAGTCTCT AAGTGCAGGC
CCCGAGCGGG TGCAGAAGCT GCTTGCCCGC GCCGGCGTTG GCTCCCGGCG GGAAGTGGAA
GGCTGGATAG AGGCCGGTCG ACTGCTGGTC AATGGCGTTC CGGTTCAGCC TGGCCAGAAG
GCTTCCACTT CTGATCGTTT TGAGCTTGAT GGCAAGCTGC TGGACGTGAG TTCAGCTGCC
GAAGTTGTGC GTCGGGTGCT GATTTACAAC AAGCCGGAAG GTGAGGTGAC CAGCCGGAAA
GACCCGGAAG GGCGGCCCAC GGTGTTTGAC CGCCTGCCGC GGCTCAAGGA CCAGCGCTGG
ATCTCCATTG GGCGTCTGGA TATCAACACT ACCGGTCTGG TGTTGTTTAC CACTGACGGT
GAGTTGGCGA ATCGCTTGAT GCATCCCTCC AGTCAGATTG ACCGGGAATA CGCGGTTCGG
GTATTCGGTG AAGTGGATGA CGCCATGATT GAGCGCCTGA AGGAAGGTGT GCTGCTTGAA
GACGGCATGG CCAAGTTTAC CGATATCAGC CCGGCGGGTG GCAAAGGTAT GAACCAGTGG
TTCCACGTAA CCTTGCTGGA AGGTCGCAAC CGGGAGGTGC GTCGCCTTTG GGAATCTCAG
GGCGTTCGGG TGAGTCGTCT CAAGCGGGTA CGGTATGGAC CGATCTTCCT GCCCAGCCGG
TTGACCATGG GCCGTTGGGA AGAGCTGGAT CAGAAGGGTG TTGATGCGCT GAGCCGTGCC
GTCGGGCTCG GCAGCGTTGC TGTACCTCAG AAAACTCCGG GAGAGCAGGC TGCCCATGAT
CGCAAGCGCC GCAAGAGTCC TGGTAAATCA CTACAACGGA CGCGTAAAGG TGGAAGCTGG
CAAGTCGCCG ATGGTGCGCC GCCAAAAGCC CGGTCAGATT CCCGCGGGAA GCCATCTGCA
GGCAAGGGCA GAAAGCCAGC ACGCTGA
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| Protein sequence | MAAKGPENKT ARSDQSLSAG PERVQKLLAR AGVGSRREVE GWIEAGRLLV NGVPVQPGQK
ASTSDRFELD GKLLDVSSAA EVVRRVLIYN KPEGEVTSRK DPEGRPTVFD RLPRLKDQRW
ISIGRLDINT TGLVLFTTDG ELANRLMHPS SQIDREYAVR VFGEVDDAMI ERLKEGVLLE
DGMAKFTDIS PAGGKGMNQW FHVTLLEGRN REVRRLWESQ GVRVSRLKRV RYGPIFLPSR
LTMGRWEELD QKGVDALSRA VGLGSVAVPQ KTPGEQAAHD RKRRKSPGKS LQRTRKGGSW
QVADGAPPKA RSDSRGKPSA GKGRKPAR
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