Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1005 |
Symbol | |
ID | 4656319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 1146178 |
End bp | 1147161 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639810968 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_958285 |
Protein GI | 120553934 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCCTG AACTTGAGCG GCGCATGCCG ACAACCTCCG ATCCACTCGG CGAGACGCTG TGTTCACTTC GTATGGACGG TACCGTCTAC GCGACTGCCG AACTGATTAG CCCGTGGGGC ATGGAGATGC CGCCGCTCGG GGGCAAAATG ATGTTTCACA TCGTCACCCA GGGAAGCTGC TGGTTGCGTT TCAAAGACCA GGATAGCCTG CTCCTTAAAA CGGGCGACCT GGCGCTGGTA CCCAAAGGGG AAGGCCACTG TATCTCCCAT AGTAACAATC AGCCGTGCGA GCCCTTTTTT GATATTCCCG TCACCCGGCT GACAGACCGC TTTGAGTTCA TGCGCTATGG CGGGGCCGGC ACGGAAGAAC AGCGCACGGG CGAAGAAGAA ACCCGACTGA CCTGCGGCGT GCTTGGCTTC GACCAGATTG CGGCTCAGAA GCTCATTCGT GAATTGCCAC AGTGCATTCA CATCAAAGGC GACGATGGCG CCCTGCCCGC CGAGCTTACA ACGCTGATAC AACTGATGGA GCAGGAAGCC CGCGCACTAT CACCCGGCGG AGTCACAGTG ATGGCCCACC TGGCAGATAT CATCGTGATT CAGGCCATAC GACACTGGAT CAACTCAAGC GCGGAAGCCA GCAAAGGCTG GCTGGGCGCG CTGAAAGATC CGAAACTGGG CAAGGCTCTG GCGGCCATAC ACGCACACCC TGAGGCTGAC TGGACAGTCA GCCGGCTGGC CAGGCACGCG GGCATGTCCC GCTCCGGGTT TTCCGCCCGG TTTACCGAGG TGATAGGCAC TTCAGTAAAA CAGTACCTGA CCGAATGGAG GATGAACCTG GCGCGTCTCA GAATTGGTCA ATCACCCGTG ACATTGACTG AGCTGGCTGA AGAGCTGGGG TACCAATCCG AAGCGGCGTT TTCGAGGGCT TACAAGCGGG TTTTCGGGGT GCCACCACTG CGGCGGAAAG GCTGCGAAAG GTAA
|
Protein sequence | MIPELERRMP TTSDPLGETL CSLRMDGTVY ATAELISPWG MEMPPLGGKM MFHIVTQGSC WLRFKDQDSL LLKTGDLALV PKGEGHCISH SNNQPCEPFF DIPVTRLTDR FEFMRYGGAG TEEQRTGEEE TRLTCGVLGF DQIAAQKLIR ELPQCIHIKG DDGALPAELT TLIQLMEQEA RALSPGGVTV MAHLADIIVI QAIRHWINSS AEASKGWLGA LKDPKLGKAL AAIHAHPEAD WTVSRLARHA GMSRSGFSAR FTEVIGTSVK QYLTEWRMNL ARLRIGQSPV TLTELAEELG YQSEAAFSRA YKRVFGVPPL RRKGCER
|
| |