| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0935 |
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| Symbol | rnfD |
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| ID | 4656574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 1064755 |
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| End bp | 1065807 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639810898 |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_958218 |
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| Protein GI | 120553867 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.495036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTTG TTCAACAGTC CTCACCCCAT GCTCGTCGCG CGCGGCCCAC GTCACGGGTC
ATGCTCTGGG TCATTCTGGC CGCTCTGCCC GGCCTGCTGG CCCAGACTCT GTTCTTTGGC
TGGGGCAACC TGATCAATGT CGTCTGGTGC ATTGCCCTGG CGCTGGGCTC TGAAGCCGCC
TTCCTGAAGC TGCGCGGCAA ACCCGTCGCC TTTTTCCTGC GTGACAACAC CGCGGCGGTC
ACCGGCCTGC TGCTCGGGCT ATCCCTGCCC CAGTTCACGC CCTGGTGGGT CTCCGGTATT
GCCGTGGTCT CAGCAATCGT AGTGGCCAAG CAGCTTTACG GTGGTCTGGG CTCCAATCCC
TTTAACCCGG CCATGGTGGG CTATGCCCTG GCATTGATCT CGTTTCCGGT CGCCATGACC
ACCAACTGGG CCGAAGCAGC CACGCTCTGG GGCGGCGCGC CCGGCTTCGG TGAGACCCTC
GCGAAGATTT TCACCGGGGG CCAGACCGCC GTCGACGGCT GGACCATGGC AACACCGCTG
GACGAATACA AACACAAGAT TGCCAGTCAC ACGTCAGTGG AAGTGCTCGG CCACCCCACC
TTTGGCGACC TGATTGCCCG GGGCTGGGAG TGGGTCAATC TGGCCTTCCT GGCCGGCGGC
GTCCTGCTGA TCGCCCTTAG AATCATAACC TGGCATATTC CGGTCGCCTT CCTGGCCGGT
ATTGCCGCCA TGAGCCTGGC CTTTGGCAGC AACGCCGACC AGTACGCGCC TTTGCAACTG
CACCTGCTGG CCGGTGGTAC CATGCTTGGC GCGTTCTTTA TTGCCACCGA CCCGGTTTCG
GCAGCCACCA GCCATCAGGG CAAGCTGATA TACGGTGCCG GCATCGGTGT CCTGGTGTAC
CTGATTCGCA GTTGGGGCAA CTATCCCGAT GCGGTCGCGT TCAGCGTGCT ACTGATGAAC
TTCGCGGTCC CGTTTATCGA CCATTACACA CCACCCCGCA CTTACGGCCA TCACAAGGCC
CGCCGGGGTG TCCCGGGCCG GAGTGGAGGT TGA
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| Protein sequence | MALVQQSSPH ARRARPTSRV MLWVILAALP GLLAQTLFFG WGNLINVVWC IALALGSEAA
FLKLRGKPVA FFLRDNTAAV TGLLLGLSLP QFTPWWVSGI AVVSAIVVAK QLYGGLGSNP
FNPAMVGYAL ALISFPVAMT TNWAEAATLW GGAPGFGETL AKIFTGGQTA VDGWTMATPL
DEYKHKIASH TSVEVLGHPT FGDLIARGWE WVNLAFLAGG VLLIALRIIT WHIPVAFLAG
IAAMSLAFGS NADQYAPLQL HLLAGGTMLG AFFIATDPVS AATSHQGKLI YGAGIGVLVY
LIRSWGNYPD AVAFSVLLMN FAVPFIDHYT PPRTYGHHKA RRGVPGRSGG
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