| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0923 |
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| Symbol | ispD |
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| ID | 4656562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 1054878 |
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| End bp | 1055579 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639810886 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_958206 |
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| Protein GI | 120553855 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATG CAGATCTTTG GCTTATTGTC CCCGCCGCCG GTATCGGCCA GCGCATGAAC
GCCGAATGCC CCAAGCAATA CCTCAAAATC AATAACCGTT TCATCCTGGA TATCACCCTG
TCCCGTTTGT TGGACAACGC CCCGTTTAAA GGTTGTATGG TGCCGCTGAA TCCGAAGGAC
CACTGGTGGC CGGAGAGTGA GTCGGCGAGG GATGATCGGG TGCAGACCTG TACTGGGGGC
AAAGAACGGG CGGATTCGGT GTTGTCGGCT CTGGTAGCCC TGGAGGGGCA GGCGGCGGAT
AATGACTGGG TGCTGGTACA TGATGCGGCG CGGCCATGTG TTCATTCTGA AGATCTGTCC
CGTCTGATTG AGACCTTGTC TGAGCATCCG GTGGGTGGTT TGCTGGCTGC GCCGGTGGCG
GACACGTTGA AGCTTGCGGA GGCCGGATCA TTGCCGGTGG TGAGTGAGAC CATTGACCGG
AGCCGGTTGT GGCGGGCGTT GACGCCGCAG ATGTTCCGGT TCGGAGCGTT AAAACAGGCG
TTGTCATTGT GTCTGGAACG TGGCCAGGCG ATTACGGATG AGTCCTCTGC CATGGAGTTT
TCCGGTAACA TGCCGGTTCT GGTGGAAGGG CGCCCGGATA ATCTGAAGAT TACGGTCCCC
TCGGATCTGG CGTTGGCGGA GTTTATCCTC GGGCGTCAGT GA
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| Protein sequence | MKNADLWLIV PAAGIGQRMN AECPKQYLKI NNRFILDITL SRLLDNAPFK GCMVPLNPKD
HWWPESESAR DDRVQTCTGG KERADSVLSA LVALEGQAAD NDWVLVHDAA RPCVHSEDLS
RLIETLSEHP VGGLLAAPVA DTLKLAEAGS LPVVSETIDR SRLWRALTPQ MFRFGALKQA
LSLCLERGQA ITDESSAMEF SGNMPVLVEG RPDNLKITVP SDLALAEFIL GRQ
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