| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0909 |
|---|
| Symbol | |
|---|
| ID | 4656340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1038755 |
|---|
| End bp | 1039447 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639810872 |
|---|
| Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
|---|
| Protein accession | YP_958192 |
|---|
| Protein GI | 120553841 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4229] Predicted enolase-phosphatase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGAG TGATCCTGAC GGACATCGAG GGCACCACCA GTTCGATCTC GTTCGTACAC
GATGTCCTGT TTCCCTACGC CAGCGAGCAC TTGCCGGAGT TTATCCGGGC CAACCATCAC
ACCTTGCCGG CGGTGGCGGA ACAGCTGGTT CGGGTGGCAG AGATCAGCGG TACCGACCGG
AAAGATATCG ATGGCCTCAT CAATGTGCTG CAAGAGTGGA TTGCCGAAGA CCGCAAGGAG
GGGGCGCTAA AGGCGCTGCA GGGCATGGTC TGGGAGCAGG GGTACCACAG CGGTGAACTG
AAAGGCCATA TCTATCCGGA TGCCGCGGAT TATCTCAAGC GCTGGCATGA TCGGGGCCTG
AGACTGTTCG TATATTCTTC CGGGTCCGTC AAGGCCCAGA AGCTGATCTT CGGTCATAGC
AATGAAGGCG ACTTCACGGT TTTCTTCTCT GGTTATTTCG ACACGGCCGT CGGGGGCAAA
AAGGAGTCCC AGTCCTATCG CAACATTCTT GCGGAGCTGG GGGTAGACGC GGGCACAGTG
CTGTTTCTGT CCGATGTTGA GGAAGAGCTG CGTGCCGCCG AGGAAGCCGG CCTGAAAACG
GCCTGGCTGG TACGAGAGGG CGAACTGCCG GATACCGCTC GGGTCGTGGC CAGGGATTTT
TCGGAGGTTG ATGCGCTGTT GCGCAAACGA TAG
|
|---|
| Protein sequence | MIRVILTDIE GTTSSISFVH DVLFPYASEH LPEFIRANHH TLPAVAEQLV RVAEISGTDR
KDIDGLINVL QEWIAEDRKE GALKALQGMV WEQGYHSGEL KGHIYPDAAD YLKRWHDRGL
RLFVYSSGSV KAQKLIFGHS NEGDFTVFFS GYFDTAVGGK KESQSYRNIL AELGVDAGTV
LFLSDVEEEL RAAEEAGLKT AWLVREGELP DTARVVARDF SEVDALLRKR
|
|---|
| |