| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0878 |
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| Symbol | |
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| ID | 4656080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 998331 |
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| End bp | 999308 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639810836 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_958161 |
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| Protein GI | 120553810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.175115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCG AAAACCGAAT TACCGGCCAA TTTACCGTAC CGCCGGAGCT CAGCGATAAA
CGGCTGGACC AGGCGGCGGC GGAACTGATG CCCGAGCATT CCCGCTCCCG CCTGCAGTCC
TGGATCAAGA GCGGAGCCCT GACGGTGAAT GGAAAATCCC GTAAGCCGCG GGACAAGGTA
ATGATGGGCG ATTCCCTGGC TCTCGATGCT GAGCCGGAAG TGCAGGTGAC CTGGGAAGCA
GAACCCATCA GCCTGGATAT CGTCTACGAA GATGAGCATT TGCTGGTGAT TAACAAGCCG
GCCGGGTTGG TGGTGCACCC AGCGGCCGGC CATACTGATG GCACGCTGGT GAACGCCCTG
CTGAATTACG CGCCGGAAGT GGAAAACCTG CCGAGGGCAG GTATTGTTCA CCGCCTGGAC
AAGGATACCT CCGGCATCAT GGTGGTGGCC CGCAGCCTGA TTGCACATAC CTCCCTGGTA
GACCAGTTGC AAACGCGCAC GATGGGGCGG GAGTATGAGG CCGTGGTGGT GGGCGCGCTG
ACCGGTGGTG CAACAGTTGA CGCACCTATT GGCCGTCATC CGCAGGATCG TAAACGCATG
GCCGTGGTTT CCAGTGGCAA ACCGGCGGTC ACCCATTACC GTCTGCTGGA GCGTTTTGCC
GCGCATACCC TGGTTCGTTG CAAGCTGGAA AGTGGCCGCA CCCATCAGAT CCGTGTGCAC
ATGGCGCATG TGCGCCACCC GCTGGTTGGT GATCCTGCCT ACGGTGGGCG TCTGCGGTTG
CCCAAAGGCA CTACAGAGGA GCTTCGGGAT GTACTGGCTG CGTTCACCCG GCAGGCCCTG
CATGCGAGAC AGTTGACCCT TGAGCATCCG GAAACGGGTG AGATTCTGAG CTGGGAGGTG
CCGCTACCAG AGGATATGGT TCACCTGATC GAAGCTCTGC GCAAACACGC CCGTGAGCTG
GAAGAACGTG ATTTCTGA
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| Protein sequence | MTSENRITGQ FTVPPELSDK RLDQAAAELM PEHSRSRLQS WIKSGALTVN GKSRKPRDKV
MMGDSLALDA EPEVQVTWEA EPISLDIVYE DEHLLVINKP AGLVVHPAAG HTDGTLVNAL
LNYAPEVENL PRAGIVHRLD KDTSGIMVVA RSLIAHTSLV DQLQTRTMGR EYEAVVVGAL
TGGATVDAPI GRHPQDRKRM AVVSSGKPAV THYRLLERFA AHTLVRCKLE SGRTHQIRVH
MAHVRHPLVG DPAYGGRLRL PKGTTEELRD VLAAFTRQAL HARQLTLEHP ETGEILSWEV
PLPEDMVHLI EALRKHAREL EERDF
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