| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0817 |
|---|
| Symbol | hslU |
|---|
| ID | 4656457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 925154 |
|---|
| End bp | 926485 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810776 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_958101 |
|---|
| Protein GI | 120553750 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.544231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAA TGACTCCCCG AGAGATTGTC CACGAACTGA ACAAACACAT CGTGGGCCAG
GAAGAAGCAA AACGCGCCGT CGCCATTGCC CTGCGTAACC GCTGGCGCCG CATGCAACTG
GACAGCAGCC TGCGGGATGA AATCACCCCG AAAAATATCC TGATGATCGG CCCCACCGGT
GTCGGCAAAA CGGAAATCGC CCGCCGGTTA GCCAAACTGG CGGATGCTCC CTTTCTGAAA
GTGGAAGCCA CCAAATTTAC CGAAGTGGGC TATGTAGGCC GGGATGTTGA GTCCATCATC
CGCGACCTGG CCGACATGGC GGTGAAAATG CTGCGCGAAC AGGAAATGAA GCGGCATGAA
CACCGTGCAC TGGATGCCGC CGAAGACCGC ATTCTGGATG CCCTGCTGCC GCCCCCCAGG
GATTTTAACG AAGACAGCCA GCGCACCAAT GCGGACTCCT CAACCCGACA GCTTTTCCGC
AAGAAACTGA GAGAAGGCGA GCTGGACGAC AAGGAAATCG AGATCGATTT GCGCAGCAGT
GGAGCCGGCG TGGAGATCAT GGCACCTCCG GGTATGGAAG AGATGACCTC TCAACTGCAG
AGCATGTTCT CCAACCTGTC TTCGGACAAA CGCAAAACCC GCAAGATGAA AGTGGCGGAT
GCCATGAAGC GGGTGAAGGA CGAAGAAGCC GCCAAGCTGG TGAATGAGGA AGAGATCAAG
CAGAAGGCCA TTCAGGCGGT TGAGCAGAAC GGGATTGTCT TTATCGATGA GATCGACAAG
GTTGCCAAAC GCTCGGAAAA CACCTCCTCG GATGTGTCCC GGGAAGGCGT TCAGCGCGAC
TTGTTGCCTC TGATTGAAGG CAGCACCGTA AGCACCAAAT ACGGTTCCAT TCGGACTGAC
CACATTCTGT TCATTGCCTC TGGCGCCTTC CACCTGTCCA AGCCTTCTGA CCTGATTCCG
GAACTGCAGG GCCGCCTGCC GATTCGCGTG GAGCTACAGG CGCTGACGCC GGACGACTTC
AAGCGCATTC TGACCGAACC GGATGCCTCG CTGGTGCAGC AGTATGAAGC GCTGATGGGC
ACCGAAGGTG TGAAACTGAC CTTCGCCGAC GATGCCATCG CCCGCATTGC GGAAGTGGCT
TACAAGGTGA ACGAAACCAC CGAGAATATC GGTGCGCGCC GCCTGCATAC CGTTCTTGAG
CGCTTGCTGG AAAGTCTGTC CTACGACGCT GGCGACCAGG TCACCGATAC CTTTGAGGTG
ACAGCGGACT ACGTTGACGA GAAGCTCGGC GAGCTATCTG AAGACGAAGA CCTGAGCCGC
TACATTCTCT GA
|
|---|
| Protein sequence | MSAMTPREIV HELNKHIVGQ EEAKRAVAIA LRNRWRRMQL DSSLRDEITP KNILMIGPTG
VGKTEIARRL AKLADAPFLK VEATKFTEVG YVGRDVESII RDLADMAVKM LREQEMKRHE
HRALDAAEDR ILDALLPPPR DFNEDSQRTN ADSSTRQLFR KKLREGELDD KEIEIDLRSS
GAGVEIMAPP GMEEMTSQLQ SMFSNLSSDK RKTRKMKVAD AMKRVKDEEA AKLVNEEEIK
QKAIQAVEQN GIVFIDEIDK VAKRSENTSS DVSREGVQRD LLPLIEGSTV STKYGSIRTD
HILFIASGAF HLSKPSDLIP ELQGRLPIRV ELQALTPDDF KRILTEPDAS LVQQYEALMG
TEGVKLTFAD DAIARIAEVA YKVNETTENI GARRLHTVLE RLLESLSYDA GDQVTDTFEV
TADYVDEKLG ELSEDEDLSR YIL
|
|---|
| |